Pairwise Alignments

Query, 321 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

Subject, 324 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Sphingobium sp. HT1-2

 Score =  125 bits (314), Expect = 1e-33
 Identities = 91/316 (28%), Positives = 156/316 (49%), Gaps = 8/316 (2%)

Query: 1   MSIRTKLLTVAVALLLAGHASASE-RLTLRI---GDQKGNMRAQLEAADALRDLPYDIRW 56
           +S R  L   A +LLL    +A + R  LR+   G   G+ R   +AA  ++   +D+ +
Sbjct: 2   LSRRNLLGAAAGSLLLTACGTAGKSRPKLRVSITGKGDGDTRLLFKAA-GIQPTGFDLVY 60

Query: 57  AEFPAAAPLAEALNAGAIDAGIIGDAPLLFVLASGAP-VKAIAVDKSDPYGTALLVRPEA 115
           +EF +   + EALN G++D G + + P +F  AS     + IAV   D     +LV   +
Sbjct: 61  SEFQSGHLVVEALNGGSLDYGGMSEIPPIFAAASTIQSFRQIAVAHGDVNNQVVLVPKGS 120

Query: 116 PLRSAAELKGKRIATGRGSIGHHLALKALAQAGLTEKDVEFRFLGPVDAKIALANGSVDA 175
             RS A+LKGKR+   R +   +  ++ L + GL   D+    +G  D   A + G++DA
Sbjct: 121 KARSIADLKGKRVGYVRATTAQYFLIRMLEEVGLNWDDIIPVAMGVSDGAAAFSQGALDA 180

Query: 176 WSTWEPYTALAELSGQGRVLVNGRGLSTGNSFLAATDKALEEPGRRAALQDYLNRLAAAQ 235
           W+ +      A  +   R+L    G+ +GN  ++A   AL +P + A +++YL  +    
Sbjct: 181 WAIYGFPIQRAIATEGARILRTANGILSGNYLVSAHVDALADPDKAAIIREYLALVQKGF 240

Query: 236 VWANQHLDTYSKTLAAIIGFPVEAARLQFERRQLRWQV--IDTQTVTEQQDTADFYHTHG 293
            WA  H D ++  +A  IG P +    QF R+   +++  +  + +  QQ  AD +   G
Sbjct: 241 GWAAAHQDEWAGIVAQDIGVPRDYVLDQFRRKSATYELRPVTPEAIGSQQQVADVFFKAG 300

Query: 294 LMTERLDVAPTFATGF 309
           L+ +R+DV P +   F
Sbjct: 301 LVPKRVDVRPLWDARF 316