Pairwise Alignments

Query, 321 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

Subject, 305 a.a., nitrate ABC transporter substrate-binding proteins from Magnetospirillum magneticum AMB-1

 Score = 81.6 bits (200), Expect = 2e-20
 Identities = 63/193 (32%), Positives = 92/193 (47%), Gaps = 3/193 (1%)

Query: 5   TKLLTVAVALLLAGHASASERLTLRI-GDQKGNMRAQLEAADALRDLPYDIRWAEFPAAA 63
           T+LL +AV L LA  A+A ++L L       G +   LE A+       ++ +  F    
Sbjct: 2   TRLLALAVTLFLALPAAAQDKLRLGYPAGMNGQIVTILEKANLAAARGQEVEYTFFQNGP 61

Query: 64  PLAEALNAGAIDAGIIGDAPLLFVLASGAPVKAIAVDKSDPYGTALLVRPEAPLRSAAEL 123
           P+ EA  AG +D  +    PL    A+  P +A+ V        ALLV+  +P+   A+L
Sbjct: 62  PMMEAFAAGQLDVAVTSLMPLA-TFAARLPGQAVIVSGLGHSSYALLVKAASPVAKLADL 120

Query: 124 KGKRIATGRGSIGHHLALKALAQAGLTEK-DVEFRFLGPVDAKIALANGSVDAWSTWEPY 182
           KGKRIA   GS  H   L +LA+AGL  K DVE   + P +  +AL     DA    +P 
Sbjct: 121 KGKRIAVSFGSDSHLDLLASLAEAGLDPKTDVELLNIQPAELPVALEKDHADAIVIRQPQ 180

Query: 183 TALAELSGQGRVL 195
               + S   R++
Sbjct: 181 VLRLQQSQGARLI 193