Pairwise Alignments

Query, 321 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

Subject, 310 a.a., ABC transporter, substrate binding protein (nitrate/sulfonate) from Agrobacterium fabrum C58

 Score =  208 bits (529), Expect = 2e-58
 Identities = 120/310 (38%), Positives = 188/310 (60%), Gaps = 7/310 (2%)

Query: 3   IRTK-LLTVAVALLLAGHAS-ASERLTLRIGDQKGNMRAQLEAADALRDLPYDIRWAEFP 60
           ++TK ++ +A++L L+  A+ AS +  LR+GDQ+GN RA ++A+  L+D+PY + W+EF 
Sbjct: 1   MKTKSIIRLALSLALSVAATVASAQDVLRVGDQRGNARAVMDASGVLKDVPYQVEWSEFA 60

Query: 61  AAAPLAEALNAGAIDAGIIGDAPLLFVLASGAPVKAIAVDKSDPYGTALLVRPEAPLRSA 120
            AAPL EAL A A+DAG +GDAPL F  A G   KAI   K +  G A++V+ +AP +  
Sbjct: 61  NAAPLLEALAAEALDAGSVGDAPLTFAAARGVKAKAIFATKYE--GNAIIVKNDAPYQGI 118

Query: 121 AELKGKRIATGRGSIGHHLALKALAQAGLTEKDVEFRFLGPVDAKIALANGSVDAWSTWE 180
            +L  K++A  +GS GH L L++L +AGL E  +   FL P +A +AL NGSVDA S WE
Sbjct: 119 KDLVRKKVAFVKGSAGHALILQSLKEAGLKEDAITPVFLPPAEATLALTNGSVDAVSLWE 178

Query: 181 PYTALAELSGQGRVLVNGRGLSTGNSFLAATDKALEEPGRRAALQDYLNRLAAAQVWANQ 240
           PY + A L    R++V+G+   +  S+  A++ A+E  G+R  L+D++ R A A+ W  +
Sbjct: 179 PYISFATLKSGARIIVDGKNYPS-LSYFIASEAAIE--GKRDILKDFVARSAKARAWGLE 235

Query: 241 HLDTYSKTLAAIIGFPVEAARLQFERRQLRWQVIDTQTVTEQQDTADFYHTHGLMTERLD 300
           H   YSK +A ++  P + A  +  R +   Q+I+      QQ T D Y+  G++ ++L 
Sbjct: 236 HPQEYSKIIAQLVKIPDDVALGKQTRERHAPQLINADVEKLQQSTIDLYYGAGIIDKKLK 295

Query: 301 VAPTFATGFT 310
            +      F+
Sbjct: 296 ASDLLDDSFS 305