Pairwise Alignments

Query, 316 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 337 a.a., Dipeptide transport system permease protein DppB from Xanthobacter sp. DMC5

 Score =  175 bits (443), Expect = 2e-48
 Identities = 117/338 (34%), Positives = 167/338 (49%), Gaps = 36/338 (10%)

Query: 1   MRRYLIGRVGQALLVLWGAYTITYFILYLLPGDTLAIMLSASGMEADGLSPEDLAKARTY 60
           M + L  R+  A+  L G   +T+ +  +LPGDT A     +       +P+ +A+ RT 
Sbjct: 1   MLKLLGSRLATAVPSLIGVVIVTFLLTRVLPGDTAAYFAGPAA------TPQAIAEIRTK 54

Query: 61  YGLDKGLFEQYFDLLWRALHGDLGQSLSLGRPVTALLAERLPQTLALAGAAIALSLLAGV 120
            GLDK L  Q+ D +    HGDLG SLS G+PV   +A RLP +  L  A + L+LL  V
Sbjct: 55  LGLDKSLPAQFADYVSALAHGDLGSSLSTGQPVATEIASRLPASAELTLAGLVLALLIAV 114

Query: 121 GLACLTAYLQWRPLKTALARLPSLGFSVPVFWMGLLLIQVFAFALGWFPA---------- 170
               + A  Q   +  A   + + G S+PVF+ GLLL+ VF F LGW PA          
Sbjct: 115 PFGIMAAVRQGSWIDHACRIITTAGVSLPVFFTGLLLVYVFYFKLGWAPAPLGRLDVFFS 174

Query: 171 --------------------TGSQGLASLVLPAITLAIPSAAVYAQVLQRGFQGVWQEPY 210
                               T    LA L +PAITLAI + A  A++ +     V    +
Sbjct: 175 APETVTGFYLIDSLIARDFETFRAALAQLAVPAITLAIFALAPIARMTRASMLAVLSSEF 234

Query: 211 ITTAFAKGLSRAQVQARHGLRNAALPLLTLVGLQVGNTVSGAVLVETIFSRNGVGRLAQE 270
           + TA A GL+   V   +  RNA LP++T +G+     +   VLVE +F+  G+G  A E
Sbjct: 235 VRTAKAAGLTDYTVIITYAFRNAMLPVVTTLGMVFSFLLGANVLVEKVFAWPGIGSYAVE 294

Query: 271 AVLRQDIPVVLAIVGASAAAFVVVNLLVDLFYPYLDPR 308
           A++  D   V   V A A  +V++NLL+DL Y  +DPR
Sbjct: 295 ALITSDYAPVQGFVLAMAILYVILNLLIDLAYGIIDPR 332