Pairwise Alignments

Query, 316 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 336 a.a., dipeptide ABC transporter, permease component (from data) from Pseudomonas simiae WCS417

 Score =  184 bits (466), Expect = 3e-51
 Identities = 115/339 (33%), Positives = 175/339 (51%), Gaps = 33/339 (9%)

Query: 1   MRRYLIGRVGQALLVLWGAYTITYFILYLLPGDTLAIMLSASGMEADGLSPEDLAKARTY 60
           M  ++  R+G  +   +G   +T+ ++ ++PGD + +M+    ++     PE  A+A   
Sbjct: 1   MFSFIARRLGLLIPTFFGITLLTFALIRMIPGDPVEVMMGERRVD-----PEMHAQAMER 55

Query: 61  YGLDKGLFEQYFDLLWRALHGDLGQSLSLGRPVTALLAERLPQTLALAGAAIALSLLAGV 120
            GL+K L+ QY D + +   GDLG+SL     V        P TL L+ AA+  + + G+
Sbjct: 56  LGLNKPLYAQYLDYVGKLAQGDLGESLRTRTSVWTEFTALFPATLELSMAALLFAGILGL 115

Query: 121 GLACLTAYLQWRPLKTALARLPSLGFSVPVFWMGLLLIQVFAFALGWFPATGS------- 173
               + A  +       +  +   G+S+P+FW GL+LI  F+ +LGW P +G        
Sbjct: 116 LAGVIAALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDI 175

Query: 174 ---------------------QGLASLVLPAITLAIPSAAVYAQVLQRGFQGVWQEPYIT 212
                                  L  L+LPAI L     AV A++ +     V +E YI 
Sbjct: 176 EPRTGFMLIDTLLADEPDAFWDALHHLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIR 235

Query: 213 TAFAKGLSRAQVQARHGLRNAALPLLTLVGLQVGNTVSGAVLVETIFSRNGVGRLAQEAV 272
           TA AKGLS A+V   HGLRNA +P+LT+VGLQVG  ++GAVL ETIFS  G+G+   EA+
Sbjct: 236 TAKAKGLSPARVVFVHGLRNALIPVLTVVGLQVGTLLAGAVLTETIFSWPGIGKWLIEAI 295

Query: 273 LRQDIPVVLAIVGASAAAFVVVNLLVDLFYPYLDPRITH 311
             +D PVV   +   A   ++VN +VD+ Y + +PRI H
Sbjct: 296 GARDYPVVQNGILLIACLVILVNFVVDILYGFANPRIRH 334