Pairwise Alignments

Query, 316 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 334 a.a., Dipeptide ABC transporter, permease protein DppB (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  183 bits (465), Expect = 4e-51
 Identities = 119/337 (35%), Positives = 170/337 (50%), Gaps = 33/337 (9%)

Query: 1   MRRYLIGRVGQALLVLWGAYTITYFILYLLPGDTLAIMLSASGMEADGLSPEDLAKARTY 60
           M R+++ RV   +    G   + +F++ L+PGD +  M    G++     P   A+ RT 
Sbjct: 1   MFRFILTRVSLLVPTFIGMTLLAFFLIRLVPGDPIETMAGERGID-----PARHAELRTA 55

Query: 61  YGLDKGLFEQYFDLLWRALHGDLGQSLSLGRPVTALLAERLPQTLALAGAAIALSLLAGV 120
           YG DK +  QY   + R LHGDLG+S+     V +      P T+ LA  AI  +LL G+
Sbjct: 56  YGFDKPVIVQYGIYIGRVLHGDLGKSIITQDTVMSEFLALFPATVELAVCAILFALLLGL 115

Query: 121 GLACLTAYLQWRPLKTALARLPSLGFSVPVFWMGLLLIQVFAFALGWFPATGS------- 173
               L A  +       +      G+S+P+FW GLLLI  F+  LGW P +G        
Sbjct: 116 PAGILAAVRRNSIFDHGVMATSLTGYSMPIFWWGLLLILFFSVQLGWTPVSGRIAVQYYI 175

Query: 174 ---------------------QGLASLVLPAITLAIPSAAVYAQVLQRGFQGVWQEPYIT 212
                                  L  L+LPA+ L     AV A++ +     V  E YI 
Sbjct: 176 EPETGFLLIDSLRAGDTGAFWSALHHLILPAVVLGTVPLAVIARMTRSAMLEVLGEDYIR 235

Query: 213 TAFAKGLSRAQVQARHGLRNAALPLLTLVGLQVGNTVSGAVLVETIFSRNGVGRLAQEAV 272
           TA AKGLSR +V   H LRNA +P++T++GLQVG   +GA+L ETIFS  GVG+   EA+
Sbjct: 236 TARAKGLSRLRVVGLHALRNALIPVVTVIGLQVGVLFTGAILTETIFSWPGVGKWLIEAI 295

Query: 273 LRQDIPVVLAIVGASAAAFVVVNLLVDLFYPYLDPRI 309
            R+D PV+   +       ++VNLLVD+ Y  ++PRI
Sbjct: 296 GRRDYPVLQGGMLLLGGIVMLVNLLVDVAYGVINPRI 332