Pairwise Alignments

Query, 316 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 323 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  178 bits (452), Expect = 1e-49
 Identities = 108/319 (33%), Positives = 166/319 (52%), Gaps = 16/319 (5%)

Query: 1   MRRYLIGRVGQALLVLWGAYTITYFILYLLPGDTLAIMLSASGMEADGLSPEDLAKARTY 60
           M   ++ R GQ L +L+    +++ ++ L PGD +   ++        +S +D+ + R  
Sbjct: 1   MNNIVVRRFGQLLPMLFFISLVSFLLVKLAPGDPVQAYITPR------MSLDDIKRVRHS 54

Query: 61  YGLDKGLFEQYFDLLWRALHGDLGQSLSLGRPVTALLAERLPQTLALAGAAIALSLLAGV 120
            GLD+ L  QY   L   L GDLG SL   RPV  L+ ERLP TL L GA++ L++   +
Sbjct: 55  LGLDQPLAMQYLLWLKNVLQGDLGYSLISHRPVLTLIVERLPATLGLMGASLLLAVAIAM 114

Query: 121 GLACLTAYLQWRPLKTALARLPSLGFSVPVFWMGLLLIQVFAFALGWFPATGSQGLASL- 179
            L  L    + R L   L  +  +G SVP+FW G+LLI +F+  L W P+ G + + +  
Sbjct: 115 PLGLLAGAFRHRWLDHLLNLVAYIGISVPIFWFGILLIIIFSVQLNWLPSMGMRTVGAAD 174

Query: 180 ---------VLPAITLAIPSAAVYAQVLQRGFQGVWQEPYITTAFAKGLSRAQVQARHGL 230
                    VLP + L   + + Y + ++          Y+ T  A G +RA +  RH L
Sbjct: 175 SWLDVVRHGVLPCVALTFYNLSHYVRYIRSHTITQLSADYVQTQLAYGATRAHILFRHVL 234

Query: 231 RNAALPLLTLVGLQVGNTVSGAVLVETIFSRNGVGRLAQEAVLRQDIPVVLAIVGASAAA 290
           +N  LP++TL GL     V GA + E++FS  G+G L  +++   D P+++A+V  SA  
Sbjct: 235 KNVMLPVITLFGLSFSELVVGAYVTESVFSWPGMGLLGLQSITSLDYPLIMAMVMLSACM 294

Query: 291 FVVVNLLVDLFYPYLDPRI 309
            VV NLL D+ Y   DPRI
Sbjct: 295 LVVGNLLADVLYRVADPRI 313