Pairwise Alignments

Query, 316 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 308 a.a., ABC transporter, membrane spanning protein (agrocinopine) from Agrobacterium fabrum C58

 Score =  173 bits (439), Expect = 4e-48
 Identities = 107/310 (34%), Positives = 171/310 (55%), Gaps = 9/310 (2%)

Query: 1   MRRYLIGRVGQALLVLWGAYTITY-FILYLLPGDTLAIMLSASGMEADGLSPEDLAKART 59
           M  +++ R+ +A++V+    T+T+ FI+  L GD    ML       +  +PE LA  RT
Sbjct: 1   MISFILARLVRAIIVMM--LTVTFVFIILRLGGDPARAMLG------ENATPEALAAFRT 52

Query: 60  YYGLDKGLFEQYFDLLWRALHGDLGQSLSLGRPVTALLAERLPQTLALAGAAIALSLLAG 119
            +GLD+ + EQ+   L  AL GD G S + GR V  +++ER+P+TL L  +A  LS+L G
Sbjct: 53  AWGLDRSIPEQFLIYLASALRGDFGVSAADGREVFTVISERIPKTLTLTISAFVLSILVG 112

Query: 120 VGLACLTAYLQWRPLKTALARLPSLGFSVPVFWMGLLLIQVFAFALGWFPATGSQGLASL 179
           +    + A  +      ++     LG+SVP F +GL LI VFA      P++GS      
Sbjct: 113 IPAGIIAAVRRDSAADKSVMAGAVLGYSVPNFLLGLTLIFVFAVWFRVLPSSGSSTWQHA 172

Query: 180 VLPAITLAIPSAAVYAQVLQRGFQGVWQEPYITTAFAKGLSRAQVQARHGLRNAALPLLT 239
           +LP  T  + +AA  A+  +     V ++PYI  A A G+ + +V  RH L NAA+P++T
Sbjct: 173 ILPVATFGLVNAAAIARFARSALIEVLEQPYIAAARADGIPKWEVVIRHALPNAAIPMVT 232

Query: 240 LVGLQVGNTVSGAVLVETIFSRNGVGRLAQEAVLRQDIPVVLAIVGASAAAFVVVNLLVD 299
           ++G      + G+ +VET+F+  G+G     A+   D+ VV A++    A  V +NL+VD
Sbjct: 233 MLGFVAAGLLGGSAIVETVFAWPGLGSGFVRAITLSDLNVVQAMILLFTAFMVTINLIVD 292

Query: 300 LFYPYLDPRI 309
           + Y  L+P+I
Sbjct: 293 VLYAVLNPKI 302