Pairwise Alignments

Query, 316 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 335 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  177 bits (449), Expect = 3e-49
 Identities = 112/339 (33%), Positives = 172/339 (50%), Gaps = 33/339 (9%)

Query: 1   MRRYLIGRVGQALLVLWGAYTITYFILYLLPGDTLAIMLSASGMEADGLSPEDLAKARTY 60
           M R++ G++   +    G   + +  + +LPGD + +M    G     +SPE  A+    
Sbjct: 1   MIRFIFGKLLYLVPTFLGITIVAFAFVRVLPGDPVLLMAGERG-----ISPERHAQLAEQ 55

Query: 61  YGLDKGLFEQYFDLLWRALHGDLGQSLSLGRPVTALLAERLPQTLALAGAAIALSLLAGV 120
            G  + ++EQY   L R L GDLG SL   +PV        P T+ L   AI ++ + GV
Sbjct: 56  LGFAQPIWEQYLHFLGRLLQGDLGNSLVTKKPVLTEFLALFPATVELGLVAIIIATVIGV 115

Query: 121 GLACLTAYLQWRPLKTALARLPSLGFSVPVFWMGLLLIQVFAFALGWFPATG-------- 172
            +  + A  +             +GFS+P+FW GLLLI +F+  L W P +G        
Sbjct: 116 PVGVIAAIRRGSWFDQISMTTALVGFSMPIFWWGLLLIIMFSGILQWTPVSGRISLMYFF 175

Query: 173 --------------------SQGLASLVLPAITLAIPSAAVYAQVLQRGFQGVWQEPYIT 212
                               +  L+ L+LP++ LA    AV A+  +     V  E Y+ 
Sbjct: 176 PSVTGFMLIDSLISGQKGAFASALSHLILPSVVLATIPLAVIARQTRSAMLEVLGEDYVR 235

Query: 213 TAFAKGLSRAQVQARHGLRNAALPLLTLVGLQVGNTVSGAVLVETIFSRNGVGRLAQEAV 272
           TA AKG+S ++V   H LRNA +P++T +GLQ+G  ++GA+L ETIFS  G+G+   +++
Sbjct: 236 TARAKGMSASRVVGIHALRNAMIPVITTIGLQIGVLMAGAILTETIFSWPGIGKWMIDSI 295

Query: 273 LRQDIPVVLAIVGASAAAFVVVNLLVDLFYPYLDPRITH 311
            R+D PVV + +   A   +VVNLLVDL Y  ++PRI H
Sbjct: 296 SRRDYPVVQSGLLLIAGLVMVVNLLVDLTYGLINPRIRH 334