Pairwise Alignments

Query, 316 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 329 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  196 bits (498), Expect = 6e-55
 Identities = 118/314 (37%), Positives = 178/314 (56%), Gaps = 20/314 (6%)

Query: 11  QALLVLWGAYTITYFILYLLPGDTLAIMLSASGMEADGLSPEDLAKARTYYGLDKGLFEQ 70
           QA+  + G   + +F+L L PGD   ++ +    EA   + E +A+ R+ +GLD  +  Q
Sbjct: 17  QAVPTVLGIVILNFFLLQLAPGDAADVLAA----EAGSATVETMAEMRSRFGLDLPIVHQ 72

Query: 71  YFDLLWRALHGDLGQSLSLGRPVTALLAERLPQTLALAGAAIALSLLAGVGLACLTAYLQ 130
             + L       LG S   G PV  L+ +RLP TLAL GAA+ +++  GV L  + A   
Sbjct: 73  LMNYLGNLAQFSLGFSPRYGMPVADLIGQRLPGTLALMGAALGIAIFVGVFLGSIMALFS 132

Query: 131 WRPLKTALARLPSLGF-SVPVFWMGLLLIQVFAFALGWFPATGSQGLAS----------- 178
            + L   +  + SL F SVP FW+GL+LI  F+  LGW P+ G   + S           
Sbjct: 133 GK-LPDRIISIGSLIFYSVPGFWIGLMLILTFSVKLGWLPSGGDSTIGSSLTGFAAFLDR 191

Query: 179 ---LVLPAITLAIPSAAVYAQVLQRGFQGVWQEPYITTAFAKGLSRAQVQARHGLRNAAL 235
              +VLPA++LA+   A+YA++ +     V  + Y+ TA AKG+S  ++  RH LRNA +
Sbjct: 192 LRYIVLPALSLALYFLAIYARLTRAAMLEVKSQDYVRTARAKGVSPFRLITRHILRNALI 251

Query: 236 PLLTLVGLQVGNTVSGAVLVETIFSRNGVGRLAQEAVLRQDIPVVLAIVGASAAAFVVVN 295
           P+ T+ G+ +G  + GAV+VET+FS  G+GRLA EAV+ +D  V+L I+  S+   ++VN
Sbjct: 252 PITTMAGMHIGGLLGGAVVVETVFSWPGLGRLAFEAVMARDFSVLLGILLLSSLVVIIVN 311

Query: 296 LLVDLFYPYLDPRI 309
             VDL   +LDPRI
Sbjct: 312 AAVDLLQAWLDPRI 325