Pairwise Alignments

Query, 316 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 329 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  180 bits (457), Expect = 4e-50
 Identities = 113/323 (34%), Positives = 170/323 (52%), Gaps = 22/323 (6%)

Query: 1   MRRYLIGRVGQALLVLWGAYTITYFILYLLPGDTLAIMLSASGMEADGLSPEDLAKARTY 60
           +RR  I  +   L+VL      T+ +L    GD +   L + G    GL        R  
Sbjct: 8   LRRRAISAIPVLLIVL----IFTFVLLENASGDAVDAYLVSIGGGDAGLRDA----LREQ 59

Query: 61  YGLDKGLFEQYFDLLWRALHGDLGQSLSLGRPVTALLAERLPQTLALAGAAIALSLLAGV 120
           YGL+  +  +++      L  D G SL+  RPV  L+ ERLP TL L G+A AL+ + G 
Sbjct: 60  YGLNGSMLARFWLYASSVLRLDFGWSLAFDRPVLGLILERLPNTLLLMGSATALAFILGT 119

Query: 121 GLACLTAYLQWRPLKTALARLPSLGFSVPVFWMGLLLIQVFAFALGWFPATGSQGLAS-- 178
            L  +        +   L+ L    ++ P FW+GL+L  VFA  L W P +G + +AS  
Sbjct: 120 TLGIVAGARPGGLMDRVLSTLSLALYATPGFWLGLVLAIVFAVQLRWLPTSGIETIASGK 179

Query: 179 ------------LVLPAITLAIPSAAVYAQVLQRGFQGVWQEPYITTAFAKGLSRAQVQA 226
                       LVLP  +L +   A++ +V++     +W   ++  A AKGLSR ++  
Sbjct: 180 QGFARALDIARHLVLPVASLGLIYLALFLRVMRTAMAAIWPLDFVLFAEAKGLSRRRIVL 239

Query: 227 RHGLRNAALPLLTLVGLQVGNTVSGAVLVETIFSRNGVGRLAQEAVLRQDIPVVLAIVGA 286
           RH  RNAALPL+T++GLQ    + G+V++E++F+  G GRLAQEAV  +D P+++ I+  
Sbjct: 240 RHVARNAALPLVTVLGLQAATMLGGSVVIESVFAIPGFGRLAQEAVSGRDTPLLMGIILT 299

Query: 287 SAAAFVVVNLLVDLFYPYLDPRI 309
           SA   ++VNL VD+ Y   DPRI
Sbjct: 300 SAVFVILVNLAVDILYAVFDPRI 322