Pairwise Alignments

Query, 302 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 303 a.a., peptide transporter from Pseudomonas simiae WCS417

 Score =  191 bits (485), Expect = 2e-53
 Identities = 112/297 (37%), Positives = 165/297 (55%), Gaps = 18/297 (6%)

Query: 1   MTLDIPLSPLDTAPSEPRPAATWRRRTRWQRAYQMLAPLLRRPGFSLALLIVLFALLCAL 60
           MT   P+S +D +   P P   +     WQ          +  G    LL +L  + CA+
Sbjct: 1   MTTPTPVSAVDQSLLYPSPYKEF-----WQA-------FSKNKGAVAGLLFMLLIVFCAI 48

Query: 61  APHWLSSFDPYATAPADKLSPPS------LAHWFGTDELGRDLYTRVVYGARLSVLAALL 114
              W++  +P        L+PP+      +    GTDELGRDL +R++ G+RLS+L  L 
Sbjct: 49  FAPWVAPHNPSEQYRDFLLTPPAWLEGGQMQFLLGTDELGRDLLSRLIQGSRLSLLIGLS 108

Query: 115 AVAIALLGGLGLGVLAGFAGGHVDAALMRLIDVLLALPGLLLALAIVTAIGFGTVPVAVA 174
           +V ++L+ G+ LG+ AGF    +   +MRL+D++LALP LLLA+AIV  +G G +   +A
Sbjct: 109 SVVMSLIPGILLGLFAGFFPRLLGPTIMRLMDIMLALPSLLLAVAIVAILGPGLINTVIA 168

Query: 175 VGVGILPGFARTTRAEVLRIKTLPFVEAARLCGASWARTLLRHVLPNAWSPVAVLATLDF 234
           + +  LP + R TRA V+      +V AARL GA   R +   VLPN  +P+ V ATL F
Sbjct: 169 IAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLMFITVLPNCMAPLIVQATLSF 228

Query: 235 GAAILATAGLSFLGFGAAPPAAEWGTLIANGRHFLITAPWLSLLPGLFVVAVVFSLN 291
            +AIL  A L FLG G  PP  EWGT++A+ R ++  A W+  LPGL ++  V ++N
Sbjct: 229 SSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAIN 285