Pairwise Alignments

Query, 302 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 271 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  202 bits (513), Expect = 9e-57
 Identities = 105/251 (41%), Positives = 149/251 (59%), Gaps = 1/251 (0%)

Query: 49  LLIVLFALLCALAPHWLSSFDPYATAPADKLSPPSLAHWFGTDELGRDLYTRVVYGARLS 108
           +LI +  +L  +A  W + ++P A     KL PPS+AHW GTDE GRD+ +R + GA  S
Sbjct: 13  VLIAVLLVLAVVAAVW-TPYNPLAIDLRSKLQPPSMAHWLGTDEFGRDVASRAMQGAATS 71

Query: 109 VLAALLAVAIALLGGLGLGVLAGFAGGHVDAALMRLIDVLLALPGLLLALAIVTAIGFGT 168
            L ALL V +A   GL +GV+AGF  G  D  LM   D LLA PGLLLAL ++  +G   
Sbjct: 72  CLVALLTVTLATAIGLVVGVVAGFVRGWTDRVLMAFNDTLLAFPGLLLALGVMVIVGANK 131

Query: 169 VPVAVAVGVGILPGFARTTRAEVLRIKTLPFVEAARLCGASWARTLLRHVLPNAWSPVAV 228
             + +A+ +   P   R  R  VL ++   +VEA+R+ G S   T+ RH+LPN  +PVAV
Sbjct: 132 WGIVLALSMAYAPSVVRVVRGTVLSLREREYVEASRMIGNSELYTMWRHILPNCVAPVAV 191

Query: 229 LATLDFGAAILATAGLSFLGFGAAPPAAEWGTLIANGRHFLITAPWLSLLPGLFVVAVVF 288
           LAT  FG  +L+ + LSFLG G  PPA  WG ++A+ R ++ +A WL ++PGL +   + 
Sbjct: 192 LATSMFGWVLLSESALSFLGLGVPPPAPTWGNMLASARPYMASAVWLCVVPGLCIALTLL 251

Query: 289 SLNHLARSAEE 299
            +N L  S  +
Sbjct: 252 GINLLGESLRD 262