Pairwise Alignments

Query, 302 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 303 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  178 bits (452), Expect = 1e-49
 Identities = 101/259 (38%), Positives = 144/259 (55%), Gaps = 3/259 (1%)

Query: 34  QMLAPLLRRPGFSLALLIVLFALLCALAPHWLSSFDPYATAPADKLSPPSLAHWFGTDEL 93
           + L   LR P     + ++L  L  A+A  W+   DP+    A    P S   W G+D L
Sbjct: 30  EALRMFLRNPAAIAGMAMLLIVLAVAIAGPWVYPADPFEIKAAPLTPPFSEDAWLGSDYL 89

Query: 94  GRDLYTRVVYGARLSVLAALLAVAIALLGGLGLGVLAGFAGGHVDAALMRLIDVLLALPG 153
           GRD+ T ++YG R ++L   +A  +++L G+ LG  AG+ GG +DAALM+L +    LP 
Sbjct: 90  GRDVLTALIYGGRATLLVGAVAALLSVLIGITLGAFAGYYGGKIDAALMKLTEFFQVLPA 149

Query: 154 LLLALAIVTAIGFGTVPVAVAVGVGILPGFARTTRAEVLRIKTLPFVEAARLCGASWART 213
           LL A+ +VT      V V +A+G+    G AR TRAE ++ + L FV A R  GA  AR 
Sbjct: 150 LLFAMVVVTLFSPTLVTVTLAIGIVSWTGTARLTRAEFMKYRGLEFVRAERAIGAGDARI 209

Query: 214 LLRHVLPNAWSPVAVLATLDFGAAILATAGLSFLGFGAAPPAAEWGTLIANGRHFLITAP 273
           + + +LPNA  P+ V ATL  GAAIL  AGLSFLG G  P    WG +I + R ++++  
Sbjct: 210 IWKVILPNALPPLVVSATLAIGAAILFEAGLSFLGLG-DPNQMSWGLMIGSSRQYVLSCW 268

Query: 274 WLSLLPG--LFVVAVVFSL 290
           W    PG  +F+  +  SL
Sbjct: 269 WAVAFPGAAIFITVLAVSL 287