Pairwise Alignments

Query, 302 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 274 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  188 bits (478), Expect = 1e-52
 Identities = 105/259 (40%), Positives = 150/259 (57%), Gaps = 1/259 (0%)

Query: 35  MLAPLLRRPGFSLALLIVLFALLCALAPHWLSSFDPYATAPADKLSPPSLAHWFGTDELG 94
           ML  L+ R    ++ L++L   + A+     +S DP  TA  ++L  PS  H  GTDELG
Sbjct: 1   MLRQLMHRRIVMVSALVLLVIAVMAIGAPLFASADPNDTAVLERLKAPSAEHLLGTDELG 60

Query: 95  RDLYTRVVYGARLSVLAALLAVAIALLGGLGLGVLAGFAGGHVDAALMRLIDVLLALPGL 154
           RD+Y+R+V+GAR S+  A L    A++ G  LG++AGF    +DA LMR++D +++ P +
Sbjct: 61  RDMYSRIVHGARYSLAIAALTALGAVVAGTVLGLMAGFFR-RLDAPLMRVVDAMMSFPDI 119

Query: 155 LLALAIVTAIGFGTVPVAVAVGVGILPGFARTTRAEVLRIKTLPFVEAARLCGASWARTL 214
           LLA+A+V  +G   V   +A+ +   P  AR  RA  L ++ L FVEA R  G   +R L
Sbjct: 120 LLAIALVAILGPSLVNTVLALVLVYTPRVARVVRASTLVVRELLFVEAVRALGVRTSRIL 179

Query: 215 LRHVLPNAWSPVAVLATLDFGAAILATAGLSFLGFGAAPPAAEWGTLIANGRHFLITAPW 274
            RH+LPN  SP+ V  +  F  AILA AGLSFLG G  P    WGT++A  + +   A W
Sbjct: 180 WRHILPNLMSPILVQVSFIFAYAILAEAGLSFLGVGVPPEIPTWGTMVAGSQQYAHQAFW 239

Query: 275 LSLLPGLFVVAVVFSLNHL 293
           + L PGL ++    SL  L
Sbjct: 240 VVLFPGLAIIFTALSLQLL 258