Pairwise Alignments

Query, 302 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 298 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  204 bits (519), Expect = 2e-57
 Identities = 108/274 (39%), Positives = 156/274 (56%), Gaps = 4/274 (1%)

Query: 19  PAATWRRRT-RWQRAYQMLAPLLRRPGFSLALLIVLFALLCALAPHWLSSFDPYATAPAD 77
           PA+ ++ R  RW   Y+M    +R P     L+I+   +L AL   WL+ FDP A     
Sbjct: 13  PASAFQARCGRW---YRMGLRTVRSPAMVFGLVILAAMVLAALFAPWLAPFDPNAQNVQQ 69

Query: 78  KLSPPSLAHWFGTDELGRDLYTRVVYGARLSVLAALLAVAIALLGGLGLGVLAGFAGGHV 137
           +L PP  AHW GTD+LGRDL +RV+YG R ++L   L   ++   GL LG+ AG+ GG +
Sbjct: 70  RLLPPGAAHWLGTDQLGRDLLSRVIYGTRPTLLIVSLVALLSAPLGLLLGMCAGYFGGWI 129

Query: 138 DAALMRLIDVLLALPGLLLALAIVTAIGFGTVPVAVAVGVGILPGFARTTRAEVLRIKTL 197
           D  LMR+ D+ +A P L+LALA+V  +G G V   +A+ +   P +AR  R E   ++  
Sbjct: 130 DTLLMRVTDIFMAFPRLVLALALVAVLGPGIVNAVIAIAITAWPAYARIARTETRTVRGS 189

Query: 198 PFVEAARLCGASWARTLLRHVLPNAWSPVAVLATLDFGAAILATAGLSFLGFGAAPPAAE 257
            F++AAR+ G   AR L  H+LP       V  TLD    IL  AGL FLG GA PP +E
Sbjct: 190 DFIQAARVQGLRPARILFGHLLPICLPSTVVRVTLDMAGIILTAAGLGFLGLGAQPPMSE 249

Query: 258 WGTLIANGRHFLITAPWLSLLPGLFVVAVVFSLN 291
           WG +I+ GR ++    W++ +PG+ ++    + N
Sbjct: 250 WGAMISTGRQYIFDQWWVAAVPGVAILLGSLAFN 283