Pairwise Alignments

Query, 302 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  194 bits (494), Expect = 2e-54
 Identities = 116/292 (39%), Positives = 163/292 (55%), Gaps = 18/292 (6%)

Query: 6   PLSPLDTAPSEPRPAATWRRRTRWQRAYQMLAPLLRRPGFSLALLIVLFALLCALAPHWL 65
           P SP+D +   P P   +     WQ          R  G  + L  +   + CAL   W+
Sbjct: 11  PASPVDQSLLYPSPYKEF-----WQA-------FARNKGAVMGLAFMCLVVFCALFAPWV 58

Query: 66  SSFDPYATAPADKLSPPSLAH---W---FGTDELGRDLYTRVVYGARLSVLAALLAVAIA 119
           +  DP        L+PP       W    GTDELGRDL +R++ GARLS+L  L +V ++
Sbjct: 59  APHDPSEQYRDFLLTPPVWLEGGTWQFILGTDELGRDLLSRLIQGARLSLLIGLSSVVMS 118

Query: 120 LLGGLGLGVLAGFAGGHVDAALMRLIDVLLALPGLLLALAIVTAIGFGTVPVAVAVGVGI 179
           L+ G+ LG+LAGF    +  ++MRL+DV+LALP LLLA+AIV  +G G +   +A+ +  
Sbjct: 119 LIPGILLGLLAGFFPQLLGPSIMRLMDVMLALPSLLLAVAIVAILGPGLINTVIAIAIVS 178

Query: 180 LPGFARTTRAEVLRIKTLPFVEAARLCGASWARTLLRHVLPNAWSPVAVLATLDFGAAIL 239
           LP + R TRA V+      +V AARL GA   R +   VLPN  +P+ V ATL F +AIL
Sbjct: 179 LPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLMFVTVLPNCMAPLIVQATLSFSSAIL 238

Query: 240 ATAGLSFLGFGAAPPAAEWGTLIANGRHFLITAPWLSLLPGLFVVAVVFSLN 291
             A L FLG G  PP  EWGT++A+ R ++  A W+  LPGL ++  V ++N
Sbjct: 239 DAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAIN 290