Pairwise Alignments

Query, 302 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

 Score =  199 bits (505), Expect = 8e-56
 Identities = 102/245 (41%), Positives = 158/245 (64%), Gaps = 3/245 (1%)

Query: 48  ALLIVLFALLCALAPHWLSSFDPYATAPADKLSPPSLAHWFGTDELGRDLYTRVVYGARL 107
           A++IVL  L+   +P WL++ DP A     +L PPS AHWFGTDE+GRDL++RV+ G++ 
Sbjct: 37  AVIIVLMLLMMIFSP-WLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRVLVGSQQ 95

Query: 108 SVLAALLAVAIALLGGLGLGVLAGFAGGHVDAALMRLIDVLLALPGLLLALAIVTAIGFG 167
           S+LA L+ VAIA + G  LG L+G  GG  DA +MR++D++L++P L+L +A+  A+G  
Sbjct: 96  SILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPS 155

Query: 168 TVPVAVAVGVGILPGFARTTRAEVLRIKTLPFVEAARLCGASWARTLLRHVLPNAWSPVA 227
                +A+ +  +P + R  R + L ++   +V+AA+  GAS    +  H+L N+  P+ 
Sbjct: 156 LFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRNSLPPLI 215

Query: 228 VLATLDFGAAILATAGLSFLGFGAAPPAAEWGTLIANGRHFLITAPWLSLLPG--LFVVA 285
           V A+LD G+AIL  A L F+G GA  P+AEWG ++ANGR++++   W    PG  + + A
Sbjct: 216 VQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPGAAILLTA 275

Query: 286 VVFSL 290
           V F+L
Sbjct: 276 VGFNL 280