Pairwise Alignments

Query, 302 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 299 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  189 bits (481), Expect = 5e-53
 Identities = 108/276 (39%), Positives = 155/276 (56%), Gaps = 5/276 (1%)

Query: 17  PRPAATWRRRTRWQRAYQMLAPL-LRRPGFSLALLIVLFALLCALAPHWLSSFDPYATAP 75
           PR +A  R  T   R  + LA   L   GF++  ++VL A+   L    ++ FDP +   
Sbjct: 11  PRRSALSRLSTTTGRTLRKLADEPLGMFGFAILAILVLVAVFAPL----IAPFDPASQVL 66

Query: 76  ADKLSPPSLAHWFGTDELGRDLYTRVVYGARLSVLAALLAVAIALLGGLGLGVLAGFAGG 135
            + L PPS AH  GTDE GRD+++R+VYG R+++   L    I    GL +GV+AGF GG
Sbjct: 67  ENALQPPSWAHLAGTDEFGRDIFSRLVYGTRITIQTVLSVSIIVGPIGLAIGVMAGFFGG 126

Query: 136 HVDAALMRLIDVLLALPGLLLALAIVTAIGFGTVPVAVAVGVGILPGFARTTRAEVLRIK 195
             DA LMR  D++L+ P L+LALA   A+G G     +A+ +   P  AR  RAE L ++
Sbjct: 127 RTDAILMRATDIVLSFPSLVLALAFAAAMGAGLGTAIIAISLTAWPPIARLARAEALVVR 186

Query: 196 TLPFVEAARLCGASWARTLLRHVLPNAWSPVAVLATLDFGAAILATAGLSFLGFGAAPPA 255
              +V AARL GAS  R L  ++ P     V V  TL+    IL  A L FLG GA PP 
Sbjct: 187 NTDYVAAARLYGASPLRILFLYIAPMCIPSVIVRLTLNMAGIILTAASLGFLGLGAQPPL 246

Query: 256 AEWGTLIANGRHFLITAPWLSLLPGLFVVAVVFSLN 291
            EWG +I++GR F++   W++++PG+ ++    + N
Sbjct: 247 PEWGAMISSGRKFMLDYWWVAVMPGIAILLTSLAFN 282