Pairwise Alignments

Query, 302 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 310 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  188 bits (477), Expect = 2e-52
 Identities = 107/274 (39%), Positives = 156/274 (56%), Gaps = 2/274 (0%)

Query: 22  TWRRRTRWQRAYQMLAPLLRRPGFSLALLIVLFALLCALAPHWLSSFDPYA--TAPADKL 79
           T R++ R  RAY +           L L+I++  L  AL    L+  +P       A  L
Sbjct: 22  TSRKQARLGRAYVIWRRFSENRLALLGLVIIIALLFVALFADVLAPHNPVQGDLRNARLL 81

Query: 80  SPPSLAHWFGTDELGRDLYTRVVYGARLSVLAALLAVAIALLGGLGLGVLAGFAGGHVDA 139
            P +  +  GTD+ GRD+ +R+++G+RL++   LL   IA   GL +G ++G+AGG VDA
Sbjct: 82  PPGTAGYLLGTDDQGRDILSRLIHGSRLTLFVVLLVAIIAAPIGLIVGTVSGYAGGWVDA 141

Query: 140 ALMRLIDVLLALPGLLLALAIVTAIGFGTVPVAVAVGVGILPGFARTTRAEVLRIKTLPF 199
            LMR+ D+ LA P L+LALA+V A+G G     +A+ V   P +AR  RAE +  +   F
Sbjct: 142 ILMRITDIFLAFPKLVLALALVAALGPGIENAVLAIAVTSWPPYARIARAETMTFRNSDF 201

Query: 200 VEAARLCGASWARTLLRHVLPNAWSPVAVLATLDFGAAILATAGLSFLGFGAAPPAAEWG 259
           + A +L GAS  R +L+HV+P   S + V  TLD    IL  AGL FLG GA PP  EWG
Sbjct: 202 IAAVKLMGASPFRIVLKHVMPLCLSSLIVRVTLDMAGIILTAAGLGFLGLGAQPPLPEWG 261

Query: 260 TLIANGRHFLITAPWLSLLPGLFVVAVVFSLNHL 293
            +IA+GR F++   W++ +PG+ ++ V    N L
Sbjct: 262 AMIASGRRFILDQWWVAAMPGIAILIVSLGFNLL 295