Pairwise Alignments

Query, 342 a.a., ABC transporter, periplasmic binding component-related protein from Pseudomonas putida KT2440

Subject, 340 a.a., Riboflavin-binding protein RibY from Xanthobacter sp. DMC5

 Score = 86.3 bits (212), Expect = 1e-21
 Identities = 85/337 (25%), Positives = 138/337 (40%), Gaps = 25/337 (7%)

Query: 12  LRSLLAAALLPTTLTIAPLAIAGDKV--VLLTSWYAQAEQGGFYQALADGLYEKEGLDVS 69
           L +L A A L +T   A  A+A D V   L   W  QA+  GFY A+A G Y+ EG+D++
Sbjct: 8   LSTLAAGAALLSTAVGALPALAADPVPATLRLKWLPQAQFAGFYVAVAKGYYKAEGIDLT 67

Query: 70  IRMGGPQVNGMQLLVSKQADFIVNYDL-QILKSVEQGLPVVAVAAPFQGDPQGLMTHAD- 127
           I  GGP +    L+ +    F ++  L  +  + ++GLPVV V    Q  P   +  AD 
Sbjct: 68  INPGGPNILAENLVATGADTFGLSGGLDSVFAARDKGLPVVCVGISHQMTPFVFVARADG 127

Query: 128 -VSGLDALGGKPVLVSTSGQQTWWPWLKG--KYQLADNQARPYTFNLQPF------LADP 178
            +  L    GK V        TW+       K  L  N   P   ++QP         D 
Sbjct: 128 PIKTLQDFKGKKV-------TTWFTGANHVLKAMLTKNGIDPALVDIQPQQVSVTPFVDG 180

Query: 179 QTTQQAYASSELFQAIKAGVTP---NFFLFADAGYPPYGSTVVTRQDIIAEHPERVAGFV 235
           Q           +  IK  +       F+  D+G      T++  +    E PE V  F+
Sbjct: 181 QVDVITATRYNEYYTIKTRMGEEKLRTFVAEDSGITFPRDTLIVSETTAKEKPELVKAFL 240

Query: 236 RASMEGWKRYLDDPSAGNALIKRDNPNMTDELLAWGVSTLKQYRLVTGGEAATQGIGTMT 295
           RAS++GWK    DP      I +  P +      + ++  +  +L+T G     G+  + 
Sbjct: 241 RASIKGWKDAFSDPKGAVDTIMKAAPTLDRAHQEFQLA--EAAKLMTAGTVKQNGLFWID 298

Query: 296 DSRWQATRDFMVEAGLLGPDAPWRNAYTTRFVQDLKV 332
               + T+   ++A ++         +   F++ + V
Sbjct: 299 MDAVKITQQLFLDAKVISKPVDLDATFNRSFLEAIPV 335