Pairwise Alignments

Query, 342 a.a., ABC transporter, periplasmic binding component-related protein from Pseudomonas putida KT2440

Subject, 334 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

 Score = 54.3 bits (129), Expect = 4e-12
 Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 7/239 (2%)

Query: 17  AAALLPTTLTIAPLAIAGDKVVLLTSWYAQAEQGGFYQALADGLYEKEGLDVSIRMGGPQ 76
           A ALL  + T    A A D + L+ +W   A+    Y A A G Y + G+D+SI  G   
Sbjct: 10  ATALLMASATGVSTAFAADAMSLMLNWTPTADHAPLYYAKAKGWYSEAGIDLSIEAGKGS 69

Query: 77  VNGMQLLVSKQADFIVNYDLQILKSVEQGLPVVAVAAPFQGDPQGL--MTHADVSG-LDA 133
               Q + +  +   ++     +++  +G  V AV   +   PQG   +  + ++G  D 
Sbjct: 70  AVSAQRVGTGGSTLGISDLPTTIQAKGKGADVKAVMVIYANSPQGFYWLKSSGINGPKDF 129

Query: 134 LGGKPVLVSTSGQQTWWPWLKGKYQLADNQARPYTFNLQPFLADPQTTQ----QAYASSE 189
            G K         +  WP    K  L          + Q  +A  ++        + +  
Sbjct: 130 AGRKIGNPPGDAARLMWPAFAKKAGLDPASVTFVNVSPQAKVAALKSKSVDIISDFYNEH 189

Query: 190 LFQAIKAGVTPNFFLFADAGYPPYGSTVVTRQDIIAEHPERVAGFVRASMEGWKRYLDD 248
             +A + G    F  + DAG   YG++++     +A++P +V  FV  +   ++  + D
Sbjct: 190 DLKAREFGADLGFQAWRDAGVNVYGNSLIVNGPYLAKNPAQVKKFVAVTQRAYEACVKD 248