Pairwise Alignments

Query, 342 a.a., ABC transporter, periplasmic binding component-related protein from Pseudomonas putida KT2440

Subject, 343 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 78/310 (25%), Positives = 127/310 (40%), Gaps = 17/310 (5%)

Query: 13  RSLLAAALLPTTLTIAPL------AIAGDKVVLLTSWYAQAEQGGFYQALADGLYEKEGL 66
           RSLL  +L+   L+   L      A    ++ +   W     Q G   A   G YE+EG+
Sbjct: 10  RSLLKTSLIAGGLSAGGLLSVDAFAQGKARINMQLGWIVGGNQIGEVVAKRMGFYEQEGI 69

Query: 67  DVSIRMGGPQVNGMQLLVSKQADF-IVNYDLQILKSVEQGLPVVAVAAPFQGDPQ---GL 122
           D +I+ GGP ++G+ ++ S + +   V+    I+ +V QGLP+   A   Q  P     L
Sbjct: 70  DFAIQPGGPNIDGVAIIASGRYEVGQVSSSPSIMLAVSQGLPIKCFAVGAQKHPYTYFSL 129

Query: 123 MTHADVSGLDALGGKPVLVSTSGQQTWWPWLKGKYQLADNQARPYTFNLQPFLADPQTTQ 182
             +      D +G +  + ST+G        K K    D +      ++ P L       
Sbjct: 130 AKNPVRKPADLVGKRVGIPSTAGILLRALLAKNKIAEKDVKVVSIGADMSPLLTGQVDVV 189

Query: 183 QAYASSELFQAIKAGVTPNFFLFA--DAGYPPYGSTVVTRQDIIAEHPERVAGFVRASME 240
             + ++    AIK  + P+       DAG   Y          +   P+ +  F+RA+ +
Sbjct: 190 TGWLTNT--TAIKV-LGPDIASLTQWDAGVRLYALPYYASTKTLETQPKVIEAFLRATAK 246

Query: 241 GWKRYLDDPSAGNALIKRDNPNMTDELLAWGVSTLKQYRLVTGGEAATQGIGTMTDSRWQ 300
           GW     +  A   ++ ++ PN+  E     V  + +Y    GG A TQG G M  + WQ
Sbjct: 247 GWHHVRANRDAAVDMLVKEYPNLKREDERVAVDAMLEYAF--GGLAQTQGWGAMDPAVWQ 304

Query: 301 ATRDFMVEAG 310
              D   E G
Sbjct: 305 EQIDTYAELG 314