Pairwise Alignments

Query, 342 a.a., ABC transporter, periplasmic binding component-related protein from Pseudomonas putida KT2440

Subject, 347 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 80/336 (23%), Positives = 126/336 (37%), Gaps = 49/336 (14%)

Query: 15  LLAAALLPTTLTIAPL-AIAG-----------DKVVLLTSWYAQAEQGGFYQALADGLYE 62
           +L   LL  TL IA + A+AG             V     W  +    GF  AL  G ++
Sbjct: 2   ILTRRLLSRTLAIAAIGAVAGFSLPATGAYAETPVKFTLDWKFEGPAAGFLLALDKGYFK 61

Query: 63  KEGLDVSIRMGGPQVNGMQLL-----------VSKQADFIVNYDLQILKSVEQGL--PVV 109
            EGLDV+I  G   V  +  +           ++    F+     Q +K+V      P  
Sbjct: 62  AEGLDVTIDSGNGSVEAIPRVATGAYQMGFGDINSVMKFLDEDPSQKIKAVYMVYERPTF 121

Query: 110 AVAAP----FQGDPQGLMTHADVSGLDALGGKPVLVSTSGQQTWWPWLKGKYQLADNQAR 165
           AV         GDP+ L           LG  P      G    WP  K    L D++ +
Sbjct: 122 AVVGRKSLGVTGDPKSLEGKK-------LGAPP----PDGAFAQWPAFKQVAGLDDSKIK 170

Query: 166 PYTFNL---QPFLADPQTTQQ-AYASSELFQAIKAGVTPN---FFLFADAGYPPYGSTVV 218
             +      +P LA         +A S +    K G+  +     L A+ G   YG+ V+
Sbjct: 171 IESIGFPVREPMLAKGDVDAVFGFAFSVILNLKKQGIADDDISTILMAEHGLNLYGNAVL 230

Query: 219 TRQDIIAEHPERVAGFVRASMEGWKRYLDDPSAGNALIKRDNPNMTDELLAWGVSTLKQY 278
              D   ++PE V GF++A  +G+   +  P  G A + + N  +   +    ++     
Sbjct: 231 VNTDFAEKNPEAVKGFLKALAKGFADSVKTPEEGVAAVLKRNETLDSAIELERLNMANSM 290

Query: 279 RLVTGGEAATQGIGTMTDSRWQATRDFM-VEAGLLG 313
            + T       G+G +  +R  A+ D + V  GL G
Sbjct: 291 NIKT-PYVVENGMGGVDPARLAASLDTLKVSMGLKG 325