Pairwise Alignments

Query, 267 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 296 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 77/252 (30%), Positives = 124/252 (49%), Gaps = 20/252 (7%)

Query: 16  RIVSPLLVGALLLGVWQLACIAWKVPVYLVPSPADIGRT---LVADGPM---LLGALWMT 69
           R  S  LV ALLL VWQ +     V   ++PSPA+I      L+  G +   +  +L   
Sbjct: 47  RFASRALVPALLLAVWQASSNLGLVAPEVLPSPAEIIAAYAELIRTGELQAAIPASLARA 106

Query: 70  LKITFLSFALAVVIGTLAAFVFVQSRVVEASLFPYAILLQVTPVVAIAPLIIIWC---SD 126
           L    L  ++ +V+G  A    V   + +A L     +L+  P +A+ PL IIW      
Sbjct: 107 LTGLALGASVGLVLGLFAGLWRVGEELFDAPLQ----MLRTIPFIAMIPLFIIWFGIGEQ 162

Query: 127 TTLALVICATLVAIFPIIANTVLGLRSVNPGLLNLFHLNRASRWQVLLRLRIPSALPCFF 186
             +AL+  AT   IFP+  NT  G+R V+  L+    +   S  ++  R+ IP+ALP   
Sbjct: 163 AKIALIFGAT---IFPVYLNTYSGVRGVDQKLIEAARVFGLSHGRIATRVIIPTALPSIL 219

Query: 187 AGLRIASGLALIGAVVAEFVAGTGGTGAGLAYQILQAGFQLNIPRLFAALVLIALTGVAL 246
            GLR A+G++L+  V AE +    G G    + ++ A        + A +++ AL G+A+
Sbjct: 220 VGLRFAAGVSLLALVAAEQINARSGIG----FILINANQNQRTDIIIAGIIVYALLGIAI 275

Query: 247 FSLMALLARLSL 258
             +M ++ RL+L
Sbjct: 276 DLVMRVVERLAL 287



 Score = 22.7 bits (47), Expect = 0.009
 Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 13  SVLRIVSPLLVGALLLGVWQLACIAWKVPVYLVPSPADIGRTLVADGPMLLGALWM---- 68
           S+ R ++ L +GA +  V  L    W+V   L  +P  + RT+     + L  +W     
Sbjct: 102 SLARALTGLALGASVGLVLGLFAGLWRVGEELFDAPLQMLRTIPFIAMIPLFIIWFGIGE 161

Query: 69  --TLKITFLSFALAVVIGTLAAFVFVQSRVVEAS 100
              + + F +    V + T +    V  +++EA+
Sbjct: 162 QAKIALIFGATIFPVYLNTYSGVRGVDQKLIEAA 195