Pairwise Alignments

Query, 267 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 288 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

 Score =  137 bits (344), Expect = 3e-37
 Identities = 76/229 (33%), Positives = 127/229 (55%), Gaps = 4/229 (1%)

Query: 28  LGVWQLACIAWKVPVYLVPSPADIGRTLVADGPMLLGALWMTLKITFLSFALAVVIGTLA 87
           + +W+L    + +  +++P+P+ +  TL       L    +T    F  +AL +V+G L 
Sbjct: 55  IALWELVVRVFAIQPFILPAPSKVLATLFNPNYSWLKNTGVTAVEVFGGYALGLVLGILC 114

Query: 88  AFVFVQSRVVEASLFPYAILLQVTPVVAIAPLIIIWCSDTTLALVICATLVAIFPIIANT 147
           A +F+ SR +    FP  + L + P VA+ PL+I+W S      ++    +  FPI+  T
Sbjct: 115 ALLFITSRRLMLLAFPLLVTLNMIPKVAMGPLVIVWFSYGIGPNILITFSLCFFPILLTT 174

Query: 148 VLGLRSVNPGLLNLFHLNRASRWQVLLRLRIPSALPCFFAGLRIASGLALIGAVVAEFVA 207
           + GL    P LL+L    + SRWQ+   +++P +LP  F+G+++A+ LA+ GAVV EF+A
Sbjct: 175 IRGLNETEPELLDLVRALKGSRWQLFRYIQLPGSLPYVFSGMKVATILAVAGAVVGEFIA 234

Query: 208 GTGGTGAGLAYQILQAGFQLNIPRLFAALVLIALTGVALFSLMALLARL 256
               +  GL Y ++Q    L+ P +F A++LI   GV L+ L+ LL RL
Sbjct: 235 ----SERGLGYLMIQVQASLDTPAVFMAVLLITGLGVLLYLLVLLLERL 279