Pairwise Alignments

Query, 267 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 257 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

 Score =  178 bits (451), Expect = 1e-49
 Identities = 96/246 (39%), Positives = 146/246 (59%), Gaps = 5/246 (2%)

Query: 20  PLLVGALLLGVWQLACIAWKVPVYLVPSPADIGRTLVADGPMLLGALWMTLKITFLSFAL 79
           P L+  +LL +W LA   +K+P YL+P P ++ + LVA+ P LL   W T   T   F L
Sbjct: 13  PFLLILMLLVLWDLAIRLFKIPAYLIPPPWEVVKQLVAEWPHLLAESWKTTLATLGGFGL 72

Query: 80  AVVIGTLAAFVFVQSRVVEASLFPYAILLQVTPVVAIAPLIIIWCSDTTLALVICATLVA 139
            ++IG   A V   SRVVE+ ++P  +  Q  P VAIAPL ++W        VI A L+ 
Sbjct: 73  TILIGIPIAMVIAYSRVVESYVYPLLVFSQSIPKVAIAPLFVVWFGFGIFPKVISAFLLG 132

Query: 140 IFPIIANTVLGLRSVNPGLLNLFHLNRASRWQVLLRLRIPSALPCFFAGLRIASGLALIG 199
            FP++ +TV+G +SV P +L+L     ASR Q   ++ +P ALP  F+GL+++  LA++G
Sbjct: 133 FFPVVVSTVMGFKSVEPDMLDLSRSMGASRLQTFFKISLPQALPQIFSGLKVSVTLAVVG 192

Query: 200 AVVAEFVAGTGGTGAGLAYQILQAGFQLNIPRLFAALVLIALTGVALFSLMALLARLSLR 259
           AVV EFV    G+ +G+ Y +  A    ++P +FAALV+++  GV LF  + L+ R+ + 
Sbjct: 193 AVVGEFV----GSNSGIGYVLQVANGNFDLPLMFAALVVLSSIGVILFVAVDLVERVMI- 247

Query: 260 HWHESE 265
            WH S+
Sbjct: 248 PWHASQ 253