Pairwise Alignments

Query, 267 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 300 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

 Score =  145 bits (365), Expect = 1e-39
 Identities = 89/251 (35%), Positives = 134/251 (53%), Gaps = 12/251 (4%)

Query: 18  VSPLLVGALLLGVWQLACIAWKVPVYLVPSPADIGRTL---VADGPMLLGALW----MTL 70
           V  +L+ A LLG W+ A   +KVP +LVP  +DI   L   +A GP+     W    +T+
Sbjct: 43  VQSILLLAALLGAWEAAVRLFKVPQHLVPPVSDIVVALWRGLATGPLAKDGFWYHGGVTV 102

Query: 71  KITFLSFALAVVIGTLAAFVFVQSRVVEASLFPYAILLQVTPVVAIAPLIIIWCSDTTLA 130
               L F +   +G     V  Q   VEA L PY   LQ  P VA+AP+I++W      +
Sbjct: 103 TEILLGFLIGSGVGLAIGIVVSQMPKVEALLEPYVAALQSVPKVAVAPIIVVWLGFGIGS 162

Query: 131 LVICATLVAIFPIIANTVLGLRSVNPGLLNLFHLNRASRWQVLLRLRIPSALPCFFAGLR 190
            V+   L+  FP++  ++ G ++V+P  ++L     A+ WQ+  + + PSALP  FAGL 
Sbjct: 163 KVMIICLLTFFPVLVTSIAGFKAVDPDRIDLLRSLSATPWQIFRKAKFPSALPYIFAGLN 222

Query: 191 IASGLALIGAVVAEFVAGTGGTGAGLAYQILQAGFQLNIPRLFAALVLIALTGVALFSLM 250
           +A+  +++GAVV EFV    G  AGL   ILQ   Q +    FA  V++++ G+ L SL+
Sbjct: 223 MAAAFSVVGAVVGEFV----GAQAGLGVLILQMEAQADTGGSFAVCVVLSVIGIVLSSLL 278

Query: 251 ALLARLSLRHW 261
             + R  L HW
Sbjct: 279 RRIQRRVL-HW 288