Pairwise Alignments

Query, 267 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 256 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

 Score =  138 bits (347), Expect = 1e-37
 Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 17/250 (6%)

Query: 6   TPWLRHPSVLRIVSPLLVGALLLGVWQLACIAWKVPVYLVPSPADIGRTLVADGPMLLGA 65
           +PWL           LLV  +LL  WQ+ C  ++V  ++ PSP  I         ++ G 
Sbjct: 11  SPWL-----------LLVAVILL--WQIICAGFEVSDFIFPSPLRIWNQFWEFKEIIAGH 57

Query: 66  LWMTLKITFLSFALAVVIGTLAAFVFVQSRVVEASLFPYAILLQVTPVVAIAPLIIIWCS 125
            W T  +T   F LA+V+G L  FV   SR+  A+++P        P  A  P++++W  
Sbjct: 58  AWRTFWVTMAGFGLAIVVGVLLGFVIGSSRIAYAAIYPLMTAFNALPKAAFVPILVVWFG 117

Query: 126 DTTLALVICATLVAIFPIIANTVLGLRSVNPGLLNLFHLNRASRWQVLLRLRIPSALPCF 185
                 ++ A L++ FPI+ N   GL ++ P L ++  +  A RW VL+++ +P ++P F
Sbjct: 118 IGAGPAILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGAKRWDVLMKIGLPRSMPYF 177

Query: 186 FAGLRIASGLALIGAVVAEFVAGTGGTGAGLAYQILQAGFQLNIPRLFAALVLIALTGVA 245
           F  L++A  LA +G  V+E  A   G G    Y ++ AG  + +   FA L+++    + 
Sbjct: 178 FGSLKVAITLAFVGTTVSEMTAANEGIG----YLLISAGSAMQMGLAFAGLMVVGAMAML 233

Query: 246 LFSLMALLAR 255
           ++ L +++ +
Sbjct: 234 MYELFSVIEK 243