Pairwise Alignments

Query, 267 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 297 a.a., nitrate ABC transporter permease from Agrobacterium fabrum C58

 Score =  100 bits (250), Expect = 3e-26
 Identities = 72/253 (28%), Positives = 120/253 (47%), Gaps = 18/253 (7%)

Query: 18  VSPLLVGALLLGVWQLACIAWKVPVYLVPSPADIGRT--------LVADGPMLLGA---L 66
           + PL+V A+LLGVWQL C A   P   +P P+ +              +G   +G    +
Sbjct: 47  IPPLVVLAVLLGVWQLLCSA---PGSSLPPPSQVFEESYDLIVSPFFHNGSQDIGLGLRV 103

Query: 67  WMTLKITFLSFALAVVIGTLAAFVFVQSRVVEASLFPYAILLQVTPVVAIAPLIIIWCSD 126
            ++L+     F LA + G +   V  QS      L P   +L+  P +A  PL +    D
Sbjct: 104 LVSLERVAYGFGLAAIAGIILGAVIGQSVWAMRGLDPIFQVLRTVPPLAWLPLSLAAFQD 163

Query: 127 TTLALVICATLVAIFPIIANTVLGLRSVNPGLLNLFHLNRASRWQVLLRLRIPSALPCFF 186
           +  + +    + +I+P+I NT +G+R++     N+  + R ++ +   ++ +PSA P  F
Sbjct: 164 SNPSAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAKVLRLNQLEFFFKIMLPSAAPYIF 223

Query: 187 AGLRIASGLALIGAVVAEFVAGTGGTGAGLAYQILQAGFQLNIPRLFAALVLIALTGVAL 246
            GLRI  GL+ +  V AE + G    G G+ + I  A     +P +  AL  I + G  L
Sbjct: 224 TGLRIGIGLSWLAIVAAEMLTG----GVGIGFFIWDAWNSSRLPDIIVALAYIGVVGFML 279

Query: 247 FSLMALLARLSLR 259
             L+A L ++  R
Sbjct: 280 DKLVAALGKVITR 292