Pairwise Alignments

Query, 396 a.a., Major facilitator family transporter from Pseudomonas putida KT2440

Subject, 410 a.a., Tetracycline resistance, MFS efflux pump => Tet(C) from Variovorax sp. SCN45

 Score = 85.5 bits (210), Expect = 3e-21
 Identities = 105/394 (26%), Positives = 157/394 (39%), Gaps = 18/394 (4%)

Query: 13  ALLLFGSCLPVLGAVLIAPVLPRMHAYFAETPGVAVLVPVALTLPALVIALLAPLAGVLA 72
           A++L    L  +G  L+ P++P +      T  +       L+L AL+  L AP+ G L+
Sbjct: 20  AVILAIVTLDAIGISLVMPIVPSLLREVGHTGDLGWRFGAFLSLYALMQFLCAPVLGALS 79

Query: 73  DRVGRRALLLASMLLYSLCGLLPLWLDSLVLIVASRAGIGLAEAGIMTCCTTLMGDYFDG 132
           DR GRR +LL S+   ++  L   +  SL ++   RA  G+  A        +  D    
Sbjct: 80  DRFGRRPVLLISVAGSAIDALFMAFAPSLWMLFLGRAIAGMTGASTAVASAAI-ADLTPE 138

Query: 133 QRRARLFALQMVVTSLAAALFMGVGGALGESDWRTPFTLYAV-GALCLPLMALLLWEPR- 190
            +RAR F        L       +GG LG+   R PF   AV   L   +  L+L E R 
Sbjct: 139 NQRARWFGRMGACFGLGFIAGPAIGGVLGDYGVRLPFVAAAVLNGLTFLVGLLVLRESRP 198

Query: 191 ---ACQAASEASVDSRFPWAALTPLYLLTVLAGVSLFIVPVQ--AGYVLQLLHIDA---- 241
              A Q      +    P    T    L  L GV L +V V   AG    +   D     
Sbjct: 199 PALASQPFDRGVLHPLAPLRWATSFPALLPLLGVFLLLVLVGEVAGTTWVIYGQDRYAWN 258

Query: 242 PRQVGLAMGANQL--GVLAGALAFRLLARLPAGRLLAMGFATAGLGGGLMALASSHAPVV 299
              VGL++    L   ++ G +A  L+ R      +A+G    G G  L+A A+     +
Sbjct: 259 GTMVGLSLAVFGLLHALVQGFVAGPLVERWGERAAIAVGIIADGTGYALIAFATQGWMAI 318

Query: 300 LAVLINGLGVGLLLPTLITLVMQQVGFDQRGRATGGFTSAIFAGEFVSPLIVLALTAGVA 359
             + +  +G G+  P L   +  +VG  Q+GR  G   S         PL++  L     
Sbjct: 319 AMLPLLCMG-GVCAPALQATLSARVGQAQQGRLQGVLASITSLAAVFGPLLISPLYFAFR 377

Query: 360 THLPHALLLVAIGQLLLAPVCLSLMRHRRAVTVA 393
           T  P  + L      LL   CL ++  R   T A
Sbjct: 378 TRFPGIVWLAGASLYLL---CLPVLLRRTGRTGA 408