Pairwise Alignments

Query, 826 a.a., putative Transporter from Pseudomonas putida KT2440

Subject, 1073 a.a., RND transporter from Pseudomonas simiae WCS417

 Score = 49.7 bits (117), Expect = 9e-10
 Identities = 78/317 (24%), Positives = 131/317 (41%), Gaps = 52/317 (16%)

Query: 510 DLDWQL---RGLQGVDSTNSLALLNRRVLVGLSEGSPKWYDLVNNQA------------- 553
           DLD Q    +GL   D  N+LAL N+ + VG ++  P  Y ++ N +             
Sbjct: 189 DLDPQALAAKGLSAQDVGNALALQNQIIPVGTAKLGPNEYTILLNNSPKAIDELNDLPIK 248

Query: 554 -------TLNMVTA---GAP--RGLYNDDCSLLTLYAYLTDHKADTLARVVDSVQAFAQA 601
                  T+  V     G+P    +   D     L   L +    TL+ +    Q   + 
Sbjct: 249 TVDGALITIGQVAHVRDGSPPQTNIVRVDGHRAVLMPALKNGSISTLSIIDGIRQMLPRI 308

Query: 602 NDSEQASF---LMAAGSAGIEAATNQVVKQANRDMLWWVYGAVIVLCLVTFRSWRAVLCA 658
           N++   S    L+   S  ++ +   V ++     L  +  A+I+L L ++RS   ++ A
Sbjct: 309 NETLPPSLKTSLLGDASVFVKQSVGSVAQEGIIAAL--LTSAMILLFLGSWRS-TIIIAA 365

Query: 659 VLPLVLTSILCEALMVALGIGVKVATLPVIALGVGIGVDYALYVMSIVLAQLRQGASLSQ 718
            +PL + S +  AL+   G  + V TL  +AL VGI VD A   +  +   L QG ++  
Sbjct: 366 SIPLAVLSAI--ALLAVSGQTLNVMTLGGLALAVGILVDDATVTIENINWHLEQGKAVKT 423

Query: 719 AYY-RALLFTGKV--------VMLTGITLAIGVGTWIFSPIKFQADMGVLLAFMFVWNMV 769
           A    A    G          ++   + L  G+  ++F P      M + + F    + +
Sbjct: 424 AILDGAAQIVGPAFVSLLCICIVFVPMFLLQGIAGYLFRP------MALAVIFAMASSFI 477

Query: 770 GALILLPALAYFLL-PH 785
            +  L+P LA FLL PH
Sbjct: 478 LSRTLVPTLAMFLLKPH 494