Pairwise Alignments

Query, 826 a.a., putative Transporter from Pseudomonas putida KT2440

Subject, 791 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  793 bits (2049), Expect = 0.0
 Identities = 414/789 (52%), Positives = 547/789 (69%), Gaps = 17/789 (2%)

Query: 20  SLLERALFNHRVLVLLLCLAATLLLGWQASRLTLNASFEKMIPRDHPFIHNYLEHRQELA 79
           + LER +FN+R  V+++CL  ++ L WQA+ +  + SFEKMIP  HPFI   +EHR +LA
Sbjct: 10  TFLERLIFNNRPAVIVICLLVSIFLFWQATLIRPSTSFEKMIPLKHPFIEKMMEHRNDLA 69

Query: 80  GLGNAVRIAVANPRGSIYDKDYLHSLQQLNDAVYLLPGVDRAAMKSLWTPSTRWTGVTEE 139
            LGN VRI+V    G I+ K+Y+ +L+Q+ND V+ + GVDR+ +KSLW+PS RWT VTEE
Sbjct: 70  NLGNTVRISVEAKDGDIFTKEYMETLRQINDEVFYISGVDRSGLKSLWSPSVRWTEVTEE 129

Query: 140 GLEGGPVVPDGYDGAAASLEALKRNVERSNEIGQLVAFDQRSSIVYVPLLEKTPDGQ--- 196
           G  GG V+P  Y+G+  SL+ L+ NV +S ++G+LVA D +SSIV +PLLE  PD Q   
Sbjct: 130 GFAGGEVIPQSYNGSPESLDQLRNNVLKSGQVGRLVANDFKSSIVDIPLLESYPDPQDQG 189

Query: 197 ---ALDYTAFAHELET-LRERFQAQG--VEIHITGFAKVVGDLMDGLRQILLFFAAAIAI 250
              ALDY  F+HELE  +R +FQ Q   V+IHI GFAK VGDL+DGL  ++LFF  A  I
Sbjct: 190 KLLALDYRKFSHELEDKIRTKFQEQNPNVQIHIVGFAKKVGDLIDGLIMVVLFFGVAFGI 249

Query: 251 TAAVLYWYTRCVRSTALVVVCSLVAVIWQLGLLPLLGYALDPYSVLVPFLVFAIGMSHGA 310
           T  +L W+T C+RST  V+  +LVAV+WQLGL+   G+ LDPYS+LVPFL+FAIG+SHG 
Sbjct: 250 TLVLLLWFTNCLRSTIAVLSTTLVAVVWQLGLMHAAGFGLDPYSMLVPFLIFAIGISHGV 309

Query: 311 QKMNGIMQDIGRGMHRLVAARFTFRRLFLAGLTALLCDAVGFAVLMIIQIQVIQDLAVIA 370
           QK+NGI        + L AAR TFR+LFL G+ A+L DAVGF  L+II I VI++LA+ A
Sbjct: 310 QKINGIALQSSEADNALTAARRTFRQLFLPGMIAILADAVGFITLLIIDIGVIRELAIGA 369

Query: 371 SLGVAVLIFTNLILLPVLLSYVGVSARAARRSLRAEEAEASGAGKHAVWRFLDLFTRRRW 430
           S+GVAV++FTNLILLPV +SYVG+S RA  +S +    E      H  WR L  F   + 
Sbjct: 370 SIGVAVIVFTNLILLPVAISYVGISKRAIAKSKKDANRE------HPFWRLLSKFASPKV 423

Query: 431 AAACIAVAALMAAGGYAVSLHLKVGDLDAGAPELRADSRYNRDNAFVTRHYGASSDVFAV 490
           A   + +A +   GG   S +LK+GDLD GAPELR DSRYN+DN F+  +Y  SSDV  V
Sbjct: 424 APVSVFLALIAFGGGLWYSQNLKIGDLDQGAPELRPDSRYNKDNNFIISNYSTSSDVLVV 483

Query: 491 MVRTAPGGCSAYGTLKHVDDLDWQLRGLQGVDSTNSLALLNRRVLVGLSEGSPKWYDLVN 550
           MV+T   GCS Y  +  +D L W+++  +GV S  SL  ++++++ G++EG+ KW  L  
Sbjct: 484 MVKTKAEGCSRYEAMAPIDQLMWKMQNTEGVQSAISLVTVSKQMIKGMNEGNLKWETLSR 543

Query: 551 NQATLNMVTAGAPRGLYNDDCSLLTLYAYLTDHKADTLARVVDSVQAFAQANDSEQASFL 610
           N   LN   A A  GLYN++CSL  +  +L DHKA+TL R V +VQ FA+ N+ +   F+
Sbjct: 544 NPDVLNNSIARAD-GLYNNNCSLAPVLVFLNDHKAETLDRAVHAVQDFAKENNKDGLEFI 602

Query: 611 MAAGSAGIEAATNQVVKQANRDMLWWVYGAVIVLCLVTFRSWRAVLCAVLPLVLTSILCE 670
           +AAG+AGIEAATN+V+K++   +L  VY  V  +C++TFRSW A LC VLPLVLTS+L  
Sbjct: 603 LAAGNAGIEAATNEVIKESELTILILVYLCVATMCMITFRSWAATLCIVLPLVLTSVLGN 662

Query: 671 ALMVALGIGVKVATLPVIALGVGIGVDYALYVMSIVLAQLRQGASLSQAYYRALLFTGKV 730
           ALM  +GIGVKVATLPV+ALGVGIGVDY +Y+ S + + LR G  L +AYY+ L  TGK 
Sbjct: 663 ALMAFMGIGVKVATLPVVALGVGIGVDYGIYIYSRLESFLRAGLPLQEAYYQTLKSTGKA 722

Query: 731 VMLTGITLAIGVGTWIFSPIKFQADMGVLLAFMFVWNMVGALILLPALAYFLL-PHRKAC 789
           V+ TG+ LAIGV TWIFS IKFQADMG++L FM +WNM GAL LLPALA FL+ P + A 
Sbjct: 723 VLFTGLCLAIGVCTWIFSAIKFQADMGLMLTFMLLWNMFGALWLLPALARFLIKPEKLAG 782

Query: 790 TEQLALPAH 798
            +  +L AH
Sbjct: 783 QKGNSLFAH 791