Pairwise Alignments

Query, 826 a.a., putative Transporter from Pseudomonas putida KT2440

Subject, 1048 a.a., AcrB/AcrD/AcrF family protein from Agrobacterium fabrum C58

 Score = 50.4 bits (119), Expect = 5e-10
 Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 19/154 (12%)

Query: 641 VIVLCLVTFRSWRAVLCAVLPLVLTSILCEALMVALGIGVKVATLPVIALGVGIGVDYAL 700
           V+V+  + FR WRA L   + + +  I     +  +G  V + TL  I L  G+ VD A+
Sbjct: 351 VVVVLYLFFRDWRATLIPAITMPVALIGTIVAIYMVGFSVNILTLLAIVLATGLVVDDAI 410

Query: 701 YVMSIVLAQLRQGASLSQAYYRALLFTGKV---VMLTGITLAIGVGTWIFSPIKFQ---- 753
            V+  ++ +  +G     A   A+L T +V   V+ T  TLA      +F P+ F     
Sbjct: 411 VVLENIVRRRAEGMGPRAA---AVLGTQEVFFAVIATTATLAA-----VFIPLSFLPGQL 462

Query: 754 ----ADMGVLLAFMFVWNMVGALILLPALAYFLL 783
                + G +LAF    + + AL L P LA  +L
Sbjct: 463 GGLFREFGFVLAFAVGLSSITALTLCPMLASRML 496



 Score = 38.1 bits (87), Expect = 3e-06
 Identities = 50/230 (21%), Positives = 93/230 (40%), Gaps = 14/230 (6%)

Query: 596  QAFAQANDSEQASFLMAAGSAGIEAATNQVVKQANRDMLWWVYGAVIVLCLVTFRSWRAV 655
            QA  + N+  Q+  +M +G+  +       +++ +  ML     A+ ++ LV    + +V
Sbjct: 821  QAMEKVNELAQS--VMPSGARLLPLGEAATLEENSSGMLLTFGFAIAIIFLVLAAQFESV 878

Query: 656  LCAVLPLVLTSILCEALMVAL---GIGVKVATLPVIALGVGIGVDYALYVMSIVLAQLRQ 712
            L +V+ +    +     ++AL   G  + V +   + L VG+     + ++        Q
Sbjct: 879  LSSVIIMSTVPLGLACAVIALLVTGSSLNVYSQIGLVLLVGVMAKNGILIVEFANHLRDQ 938

Query: 713  GASLSQAYYRALLFTGKVVMLTGITLAIGVGTWIFSPIKFQADMGVLLAFMFVWNMVGAL 772
            GA++ +A  +A     + VM+T I   +G       P+      G        W +VG L
Sbjct: 939  GATVREAIEKATSIRLRPVMMTMIATILG-----GVPLVLAQGAGAEARIALGWVIVGGL 993

Query: 773  ILLPALAYFLLPHRKACTEQLALP-AHEHTRRERSSGMLEQGASFRPLEE 821
                 +  ++ P       + A P A E  R  R    LE  A  + LEE
Sbjct: 994  GFATLVTLYITPVSYLLIARFAKPQADEEIRLHRE---LELAARRKALEE 1040



 Score = 37.7 bits (86), Expect = 3e-06
 Identities = 33/157 (21%), Positives = 67/157 (42%), Gaps = 3/157 (1%)

Query: 237 LRQILLFFAAAIAITAAVLYWYTRCVRSTALVVVCSLVAVIWQLGLLPLLGYALDPYSVL 296
           L ++ L    +  I   VLY + R  R+T +  +   VA+I  +  + ++G++++  ++L
Sbjct: 337 LHEVELALGLSALIVVVVLYLFFRDWRATLIPAITMPVALIGTIVAIYMVGFSVNILTLL 396

Query: 297 VPFLVFAIGMSHGAQKMNGIMQDIGRGMHRLVAARFTFRRLFLAGLTALLCDAVGFAVLM 356
              L   + +      +  I++    GM    AA    + +F A +      A  F  L 
Sbjct: 397 AIVLATGLVVDDAIVVLENIVRRRAEGMGPRAAAVLGTQEVFFAVIATTATLAAVFIPLS 456

Query: 357 IIQIQ---VIQDLAVIASLGVAVLIFTNLILLPVLLS 390
            +  Q   + ++   + +  V +   T L L P+L S
Sbjct: 457 FLPGQLGGLFREFGFVLAFAVGLSSITALTLCPMLAS 493