Pairwise Alignments

Query, 353 a.a., BNR domain protein from Pseudomonas putida KT2440

Subject, 342 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  176 bits (445), Expect = 1e-48
 Identities = 123/345 (35%), Positives = 170/345 (49%), Gaps = 42/345 (12%)

Query: 9   LLAACCGLPPAFAGDSVDVLAQP---ALHGPQALRAVLQDVARADARLVAVGERGVVLLS 65
           +LAA   L  A A  +V   A     A+  P+A + ++ DV  A  RLVAVG+RG +L S
Sbjct: 16  MLAAALSLFGAVALPTVVQAASDTSFAIESPKAAKGLMIDVVHAGKRLVAVGDRGHILYS 75

Query: 66  DDNGATWRQATAVPVGVSLTAVQFIDARNGWAVGHAGVVLHSQDGGEHWSVQL-DGKRAA 124
           DD G+TW QA  VP    LTAV FID + GWAVGH   +L S DGG  W+ Q  D KR A
Sbjct: 76  DDQGSTWTQAK-VPTRQLLTAVFFIDDKQGWAVGHDAQILSSSDGGATWTQQYQDLKREA 134

Query: 125 ALEVQAAEAAADERRLAAAQRLLADGADKPLLALNFTDARNGLVVGAYGVAMRTDDGGRS 184
                                        PLL + F DA +GL VGAYG  + T DGG++
Sbjct: 135 -----------------------------PLLDVWFNDANHGLAVGAYGALIETTDGGKT 165

Query: 185 WQSEIGRLPNGRGLHLYALAR-QGNQVYIAGEQGLLLRSRDGGEHYEALHGPYDGSYFAA 243
           W+    RL N    HL A+A  +   ++I GEQG + RS D G+ +E L GPY+GS F  
Sbjct: 166 WEDVSDRLDNEDQYHLNAIASIKDAGLFIVGEQGSMFRSSDDGQTWEKLEGPYEGSLFGV 225

Query: 244 TVLPDGRLLLG-GLRGSLFASDDGGDSFQ-----ALANPTPASINGLR-VAGGQLLLANQ 296
                 R LL  GLRG+L+ S D G +++     A        ++G   +  G +++   
Sbjct: 226 ISTAQPRTLLAYGLRGNLYRSTDFGSTWEQVELNAARGALEFGLSGATLLEDGSIVVVGN 285

Query: 297 AGMLLRSGLGAFAAQPVAVSDGLPLTAATTAADGSIVAVGMAGAR 341
            G ++ S             D + L++ T A +G+++  G  G R
Sbjct: 286 GGSVVVSHDDGLTFSVFNRPDRISLSSVTAAGNGNLILAGQGGVR 330



 Score = 42.7 bits (99), Expect = 1e-08
 Identities = 49/178 (27%), Positives = 71/178 (39%), Gaps = 28/178 (15%)

Query: 50  DARLVAVGERGVVLLSDDNGATWRQATAVPVGVSLTAVQFIDARNGWAVGHAGVVLHSQD 109
           DA L  VGE+G +  S D+G TW +      G     +     R   A G  G +  S D
Sbjct: 189 DAGLFIVGEQGSMFRSSDDGQTWEKLEGPYEGSLFGVISTAQPRTLLAYGLRGNLYRSTD 248

Query: 110 GGEHWSVQLDGKRAAALEVQAAEAAADERRLAAAQRLLADGADKPLLALNFTDARNGLVV 169
            G  W           +E+ AA  A  E  L+ A  LL DG+               +VV
Sbjct: 249 FGSTWE---------QVELNAARGAL-EFGLSGA-TLLEDGSI--------------VVV 283

Query: 170 GAYGVAMRTDDGGRSWQSEIGRLPNGRGLHLYALARQGNQVYIAGEQGLLLRSRDGGE 227
           G  G  + + D G ++   +   P+   L     A  GN + +AG+ G+ +   DG E
Sbjct: 284 GNGGSVVVSHDDGLTF--SVFNRPDRISLSSVTAAGNGNLI-LAGQGGVRVAKADGAE 338