Pairwise Alignments

Query, 312 a.a., Nodulation protein d1 from Pseudomonas putida KT2440

Subject, 303 a.a., PCP degradation transcriptional activation protein from Xanthobacter sp. DMC5

 Score =  142 bits (358), Expect = 1e-38
 Identities = 101/306 (33%), Positives = 156/306 (50%), Gaps = 14/306 (4%)

Query: 6   LDLNLLVALDILLEEQNITRAAERLHMTQSATSGVLGRLRTFFEDELLVQVGRKMQPTPY 65
           LDLNLLV L+ LL E+N+TRAA RLH++Q A S  L RLR  F+D LLV   R M PT  
Sbjct: 6   LDLNLLVTLEALLAERNVTRAAARLHLSQPAVSAQLARLRDLFDDPLLVPARRGMTPTVK 65

Query: 66  ALELAKPVREVLLTIRASITAKPVFDPAASKRHFRLVASDYLISVVFAQVIQKIHQEAP- 124
           A+ELA P+R  L  +RA++ A+  FDPA +     +  SDY+ + V   ++  +   AP 
Sbjct: 66  AVELAGPLRAALDQLRATLEARD-FDPATADLTVTIACSDYIQAAVVMPLVVALRARAPG 124

Query: 125 -QITFEMIGPGDSSAELLMRGEVDMMIVPERYLIEGHPAQLLFEEDHVCVVWRDNPEVGE 183
            ++    + P D   + L  GE D+++   R        Q LF E +V +  R +P +  
Sbjct: 125 VRVAVRHLMP-DLIEQQLASGETDLVLTTPRPTQAHLRTQHLFAETYVLIGRRGHPRLRR 183

Query: 184 HLTLEQYMQMGHISVGFGRNRHLSIEDWFMNQYGFNRRLEVITNDFNTLPQLLVGTVRVA 243
            L++E Y ++ H+ V     +  +  D  +   G  R + +    F  +P+++  +  VA
Sbjct: 184 GLSIEDYAELEHVIVSPSGGQFRTPVDEGLAALGHRRSVVMSAASFLFIPEIVAASDVVA 243

Query: 244 TMHRRLAELYAGYLPLRLLPPPVKIPVMRE----FMLWHRSMDGDPMHRWLRERISDVIQ 299
            + RRL        P RL+   +++P + E     +LWH    G    RWLR  I++V  
Sbjct: 244 LVPRRLLR----DPPARLV--MIELPWLAEGFDVDLLWHERTHGHAGQRWLRALIAEVAG 297

Query: 300 CASTQP 305
            A + P
Sbjct: 298 AAPSAP 303