Pairwise Alignments

Query, 312 a.a., Nodulation protein d1 from Pseudomonas putida KT2440

Subject, 308 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  145 bits (367), Expect = 9e-40
 Identities = 101/300 (33%), Positives = 155/300 (51%), Gaps = 16/300 (5%)

Query: 6   LDLNLLVALDILLEEQNITRAAERLHMTQSATSGVLGRLRTFFEDELLVQVGRKMQPTPY 65
           +DLNLLV LD LL EQ++TRAAERLH++Q A S  L RLR    D LLV+ G  + PT  
Sbjct: 13  IDLNLLVILDALLSEQHVTRAAERLHLSQPAVSHALARLRDLLGDPLLVRQGGSLVPTAR 72

Query: 66  ALELAKPVREVLLTIRASITAKPVFDPAASKRHFRLVASDYLISVVFAQVIQKIHQEAPQ 125
           ALELA P+ E L  ++A + A   FDPA++KR FR+  SDY  ++    +++ + +EAP 
Sbjct: 73  ALELAPPLTEALGQVQA-LLAPNRFDPASAKRRFRVAMSDYSAAIFLPDLVRTLRREAPG 131

Query: 126 ITFEMI-GPGDSSAELLMRGEVDMM--IVPERYLIEGHPAQL----LFEEDHVCVVWRDN 178
           I  ++I    +   + ++ G++D+   + P+       PA+L    LFEE + C+V RD+
Sbjct: 132 IDLQIIQASREGMVDGVLNGDLDLAAGVFPDM------PAELRTTPLFEEHYTCLVDRDS 185

Query: 179 PEVGEHLTLEQYMQMGHISVGFGRNRHLSIEDWFMNQYGFNRRLEVITNDFNTLPQLLVG 238
                 L L  Y+   H+ +    +    IE   +      R + +    +   PQL+ G
Sbjct: 186 LPASGTLDLPTYLSRPHVLLEMRGSGTPEIER-ALTTIRERRHVAISLPHWGVAPQLIQG 244

Query: 239 TVRVATMHRRLAELYAGYLPLRLLPPPVKIPVMREFMLWHRSMDGDPMHRWLRERISDVI 298
           T  + T+  R   L   +  L  +P P  IP     + WH    GD   +WL  ++  V+
Sbjct: 245 TDLILTVSSR-GLLNIDHQHLLAVPAPFHIPSFAFELAWHARRGGDSGLQWLIGQVQGVL 303