Pairwise Alignments

Query, 312 a.a., Nodulation protein d1 from Pseudomonas putida KT2440

Subject, 298 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  138 bits (348), Expect = 1e-37
 Identities = 86/296 (29%), Positives = 143/296 (48%), Gaps = 1/296 (0%)

Query: 6   LDLNLLVALDILLEEQNITRAAERLHMTQSATSGVLGRLRTFFEDELLVQVGRKMQPTPY 65
           LDL  L   D + +  N+++AAERL M Q+A S  L +LR  F+D L  +  + MQPTP+
Sbjct: 4   LDLEWLAVFDEVYKTGNVSKAAERLGMAQAAASTALNKLRAHFDDRLFTRTAQGMQPTPH 63

Query: 66  ALELAKPVREVLLTIRASITAKPVFDPAASKRHFRLVASDYLISVVFAQVIQKIHQEAPQ 125
           A  +   +RE L  +  +   +  FDPA ++R FR+  +D    V+   ++  +   AP 
Sbjct: 64  AERIYPNLREALAQLAQAQGNRSSFDPAQAQRRFRICMTDISEVVLLPGLLDHLRHAAPG 123

Query: 126 ITFEMIGPGDSSAELLMRGEVDMMIVPERYLIEGHPAQLLFEEDHVCVVWRDNPEVGEHL 185
           +  E       S   L  GEVD+ +     L  G   Q LF ++ VC+  +++P +G  L
Sbjct: 124 VHIETEIISTLSGRRLQDGEVDLAVGFMPQLDAGFYQQTLFMQNFVCLAAQNHPRIGARL 183

Query: 186 TLEQYMQMGHISVGFGRNRHLSIEDWFMNQYGFNRRLEVITNDFNTLPQLLVGTVRVATM 245
           T +++    H  V      H +I D  + + G  R + V  + F ++ +++  T  +  +
Sbjct: 184 TRKRFEAEAHAVVSTSGTGH-AIVDTTLARLGLKRNVVVRLSSFLSVARIVAHTELLVVV 242

Query: 246 HRRLAELYAGYLPLRLLPPPVKIPVMREFMLWHRSMDGDPMHRWLRERISDVIQCA 301
            R L  + A   P++LL PP  +P       WH     DP + WLR  ++ +   A
Sbjct: 243 PRILGRVLATQEPVKLLEPPFALPDYAVKQHWHERFHADPGNAWLRRTLAQLFSGA 298