Pairwise Alignments

Query, 312 a.a., Nodulation protein d1 from Pseudomonas putida KT2440

Subject, 326 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  136 bits (343), Expect = 6e-37
 Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 4/305 (1%)

Query: 3   FHHLDLNLLVALDILLEEQNITRAAERLHMTQSATSGVLGRLRTFFEDELLVQVGRKMQP 62
           F  +DL+L+  L  +L +++++RAA RL M Q A S  L RLR    D LLV+ G  M P
Sbjct: 7   FDKIDLHLIRVLHTVLTDRSVSRAAIRLGMYQPAVSAALKRLRELSGDPLLVRSGSGMVP 66

Query: 63  TPYALELAKPVREVLLTIRASITAKPVFDPAASKRHFRLVASDYLISVVFAQVIQKIHQE 122
           T   L + +P   +L       +    FDP ++   FR+ ASDY+  +    ++ ++ ++
Sbjct: 67  TDAGLRMIEPAASILRAAEMLFSDARGFDPQSAATTFRIAASDYMDPLFLPMLVAQVKRD 126

Query: 123 AP--QITFEMIGPGDSSAELLMRGEVDMMIVPERYLIEGHPAQLLFEEDHVCVVWRDNPE 180
           AP  QI    + P       L  G+VD++I       E      LF ++ V +V +D+P 
Sbjct: 127 APLCQIEIHALSPDSDYHGHLALGQVDLVIGNWLKPPEDLHMARLFGDEVVSLVNKDHPA 186

Query: 181 VGEHLTLEQYMQMGHISVGFGRNRHLSIEDWFMNQYGFNRRLEVITNDFNTLPQLLVGTV 240
           V     LE ++   HI+          I D  +++ G  R +      F  +P ++  ++
Sbjct: 187 VRRGWDLETWLAAEHIAPTPMHPGGRGIIDQMLDELGRQRNITARCAHFGLIPDMVASSL 246

Query: 241 RVATMHRRLAELYAGYLPLRLLPPPVKIPVMREFMLWHRSMDGDPMHRWLRERISDVIQC 300
            V T  R+  E +A  LPL +L  PV +P +  + LWH         RWLRE I DV   
Sbjct: 247 LVLTTGRQYCERFAARLPLAILECPVALPRLMYYQLWHERTHSSSSARWLRECIKDV--A 304

Query: 301 ASTQP 305
           AS +P
Sbjct: 305 ASLRP 309