Pairwise Alignments

Query, 312 a.a., Nodulation protein d1 from Pseudomonas putida KT2440

Subject, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  141 bits (356), Expect = 2e-38
 Identities = 87/300 (29%), Positives = 145/300 (48%), Gaps = 6/300 (2%)

Query: 1   MRFHHLDLNLLVALDILLEEQNITRAAERLHMTQSATSGVLGRLRTFFEDELLVQVGRKM 60
           M    +DLNL +  D +  E N+TRA + + +TQ A S  L RLR  F D L V+  + M
Sbjct: 1   MNLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALSRLRETFNDPLFVRTAQGM 60

Query: 61  QPTPYALELAKPVREVLLTIRASITAKPVFDPAASKRHFRLVASDYLISVVFAQVIQKIH 120
            PTP A  +  PVR  L  +R S+     F+P  + + FR+  +D   +V+   + Q++ 
Sbjct: 61  VPTPMAQNIIGPVRNALALLRTSVQESRTFNPQQANKTFRISMTDLTEAVILPPLFQRLR 120

Query: 121 QEAPQITFE-MIGPGDSSAELLMRGEVDMMIVPERYLIEGHPAQLLFEEDHVCVVWRDNP 179
           + AP +  E  +     + + L  G +D  I              L ++ +VC + + +P
Sbjct: 121 RLAPAVMIESFLCKRRETTKELAAGRLDFAIDAPLNTDPQVRHIKLMQDRYVCALRQGHP 180

Query: 180 EVGEHLTLEQYMQMGHISVGFGRNRHLSIEDWFMNQYGFNRRLEVITNDFNTLPQLLVGT 239
                LTL+ Y+ M HI +   RN  L   D  + + G  R++ + +  +    Q+L  T
Sbjct: 181 LADSKLTLDSYLGMTHIHISSRRN-GLGYVDLALGKMGVQRKVALRSQHYLMASQVLQQT 239

Query: 240 VRVATMHRRLAELYAGYLPLRLLPPPVKIPVMREFMLWHRSMDGDPMHRWLRERISDVIQ 299
               T+  R A  +     LR    PV++P +   + WH S D DP +RW+RE+I+++ +
Sbjct: 240 DMAMTVPERFARRH----QLRYQALPVEVPALETHLYWHESTDQDPANRWMREQITELCE 295