Pairwise Alignments

Query, 754 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 1008 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  290 bits (743), Expect = 2e-82
 Identities = 165/429 (38%), Positives = 255/429 (59%), Gaps = 10/429 (2%)

Query: 315 RRSSHAAATDHLSGLHNRRQFVEVASQVL-TRQRGKRRLMAILFIDMDRFKSINDSLGHK 373
           R   H A  D L+GL NRR  ++   + +    RG RR  A+LF+D+D FK++ND+LGH 
Sbjct: 569 REIEHLAFYDTLTGLPNRRLLLDRLKRAIGATARGSRRC-ALLFLDLDNFKTLNDALGHD 627

Query: 374 IGDLLLQAVAGRIQRLLEPGDEASRFGGDEFVVLLAGERSE-----EQINAWVHELVQKL 428
           IGD++L+ VA R+Q  L  GD  +R GGDEFVV+L    ++      Q       ++ +L
Sbjct: 628 IGDVMLKQVAQRLQDCLREGDMVARLGGDEFVVILEDLSTQTVVATSQTETMGAAILARL 687

Query: 429 SATYALDGQEVNTSPSVGVSICPRDGQDIDSLIRSADAAMYSAKQAGRAQFRFFDPSLNL 488
           +  Y L  Q+ +++ S+G ++       ++ +++ AD AMY AK  G    RFF+  +  
Sbjct: 688 NKPYQLGLQQHHSTCSIGAALFDAKNASMEEVLKQADIAMYYAKTDGGNALRFFEAGMQT 747

Query: 489 ADIQAFTLEQAFGSALAERQFVLHYQPQMRLDTHQVQGYEALVRWDHPEFGLLYPDRFID 548
                 TLE    +A+A+RQFVLH+Q Q+  + ++V G E LVRW HP  GLL P  FID
Sbjct: 748 TITARATLESELHTAIADRQFVLHFQSQVTHE-NKVTGAEVLVRWRHPVRGLLLPHEFID 806

Query: 549 LAERSGFIVELGWEVLQLACEALSSW--DAQGRKTRLAVNVSALQLRQADFADRLLSKLQ 606
           +AE +G I+ LG  VL+ AC  L +W  D + R  +L+VNVSA Q R+ DF D++    +
Sbjct: 807 VAEDTGLIIPLGLWVLETACAQLMAWRDDPRRRHLQLSVNVSARQFREQDFVDQVRLVFK 866

Query: 607 HHGIAPQQLELEITETTILDPEGTAVAHLHTLRGAGLGISLDDFGRGYAGFAHLHSLPLS 666
             G  P++L+LE+TE+ + +    A+  ++ L   G+  S+DDFG GY+  +++  LPLS
Sbjct: 867 RTGADPRKLKLELTESLLHEKVIDAIGKMNALAALGIQFSMDDFGTGYSSLSYMTQLPLS 926

Query: 667 KLKIDRSLIAALSNSHDDSPIVSSTIILAKRLGLEVVAEGVETREQVVYLKLAGCDIAQG 726
           ++KID+  + ++  +     I+ + I +A+ L L++VAEGVET+ Q  +L+  GC + QG
Sbjct: 927 QIKIDKFFVHSIGLNPKVELIIQTIIGMARNLELQIVAEGVETQAQRDFLERHGCRVCQG 986

Query: 727 YHFSRPLSL 735
           Y F RP  L
Sbjct: 987 YLFGRPQPL 995