Pairwise Alignments

Query, 754 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 1059 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  317 bits (811), Expect = 3e-90
 Identities = 177/450 (39%), Positives = 265/450 (58%), Gaps = 9/450 (2%)

Query: 300  QQVNQQLIVRLEDEHRRSSHA-----AATDHLSGLHNRRQFVEVASQVLTRQRGKRRLMA 354
            ++++  +   ++   R+ S A     A  D L+ L NR   +E     L + + K + + 
Sbjct: 599  ERISHYIFTSIDVSDRKRSEARIRFLAHHDVLTELPNRSLCIERLGLALQQAQRKGQRVG 658

Query: 355  ILFIDMDRFKSINDSLGHKIGDLLLQAVAGRIQRLLEPGDEASRFGGDEFVVLLAGERSE 414
            +LFID+DRFK+INDSLGH +GD LL++VA R+ + + PGD  SR GGDEFVV+L      
Sbjct: 659  VLFIDLDRFKNINDSLGHHVGDALLRSVAARMSQAVRPGDTVSRLGGDEFVVVLNNVADG 718

Query: 415  EQINAWVHE-LVQKLSATYALDGQEVNTSPSVGVSICPRDGQDIDSLIRSADAAMYSAKQ 473
            ++I + V   L+  +   + +DG E++ S SVG+++ P D QDID+L+R AD AMY +K 
Sbjct: 719  QEILSLVERRLISLIRQPHDIDGAEIHVSCSVGIAVYPDDAQDIDALMRHADVAMYQSKA 778

Query: 474  AGRAQFRFFDPSLNLADIQAFTLEQAFGSALAERQFVLHYQPQMRLDTHQVQGYEALVRW 533
            +GR   RFF P +N    Q   LE +   A+   +  LHYQP++   + ++   EAL+RW
Sbjct: 779  SGRDTARFFTPEMNERAQQRLQLESSLRHAIERDELSLHYQPRIDAHSGELICVEALLRW 838

Query: 534  DHPEFGLLYPDRFIDLAERSGFIVELGWEVLQLACEALSSWDAQGRKT-RLAVNVSALQL 592
               E G + P +FI +AE SG IV +G  V++ AC   ++W   G    R+A+N+SALQL
Sbjct: 839  QSAELGQVRPAQFIPIAEESGQIVAIGAWVIEQACAQHAAWRRDGLGAIRVAINMSALQL 898

Query: 593  RQADFADRLLSKLQHHGIAPQQLELEITETTILDPEGTAVAHLHTLRGAGLGISLDDFGR 652
            R     + L   +  +G++P  LE+E+TE+T++D    ++  LH L+  G+ +S+DDFG 
Sbjct: 899  RDGGLLEVLRGAIALYGVSPGDLEIELTESTLMDAAEQSLVQLHALKSLGVMLSIDDFGT 958

Query: 653  GYAGFAHLHSLPLSKLKIDRSLIAALSNSHDDSPIVSSTIILAKRLGLEVVAEGVETREQ 712
            GY+   +L+  P+ KLKIDRS I  +     D  I  + I L   LGL VVAEGVE RE+
Sbjct: 959  GYSSLNYLNRFPIDKLKIDRSFIHKMLGDPTDMAIARAIIGLGHTLGLRVVAEGVERREE 1018

Query: 713  VVYLKLAGCDIAQGYHFSRPLSLAQL--WV 740
               L+ A CD  QGY  SRP+   +L  W+
Sbjct: 1019 ADTLRAARCDELQGYLISRPMPAGKLAGWI 1048