Pairwise Alignments

Query, 316 a.a., Site-specific recombinase, phage integrase family from Pseudomonas putida KT2440

Subject, 400 a.a., Integrase-like protein from Sphingobium sp. HT1-2

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 94/348 (27%), Positives = 142/348 (40%), Gaps = 71/348 (20%)

Query: 9   RAATRDNTRRSYQAAIEHFESHW---GGFL--PATAESIARYLADHADQHAV-STLRQRL 62
           +AA+  ++ R+  + IE F+ HW    G +  PAT E++A YL   A Q A  ++L +  
Sbjct: 42  QAASSPHSLRALASDIEAFD-HWCRRNGRVTSPATPETVADYLDARAGQGAKPASLGRYK 100

Query: 63  AALSQWHVAQGFPDPTKAPLVRQVLRGIRTLHPTPPKQAAPLLLQHLQTAVTCFEEEARQ 122
           A++++ H      DPT+A LV+  LR IR    +   QA PL     +  V   E +A +
Sbjct: 101 ASIAKIHQLLDIKDPTQAELVKLRLRAIRREKGSTQAQARPL---RFKGPVRNVERDAPR 157

Query: 123 AREHHDL----AALRRARRDSALLLLGFWRGFRGDELARLRIEHI-QAQAGVGITLFLPR 177
                 L    A      R+ ALL + +  G R  EL  + +EHI  A       L + R
Sbjct: 158 GLNVRGLLEACADDLPGLRNRALLSVAYDTGLRASELVAVEVEHIVDAIDPEARLLTISR 217

Query: 178 SKGDREALGVQHRTPALKALCPVTAYLQWLEVAGIAHGPVFRKL---------------- 221
           SKGD+E  G      A  +   V A   W   A I  GP+FR++                
Sbjct: 218 SKGDQEGKG----ATAFLSPRSVRAIAAWTAAADIEEGPLFRRVQVRRYKARAAVKGRRI 273

Query: 222 ------DRWG----------------NLGDNALNSNSLVGLLRRMLERAGVPAAL----- 254
                 + W                 ++G+ AL+  S+  + R M+ RA    AL     
Sbjct: 274 ETISGRESWDLRKTLPKSAVPARTEYDVGEGALHPGSIGPIWRAMIRRAFDKGALSDLTA 333

Query: 255 ---------YTGHSLRRGFATWATANGWELKSLMSYVGWKDAKSALRY 293
                     + HS R G      A+G +L  +M  + WK  +  L Y
Sbjct: 334 DDLAQLLKGVSAHSTRVGLNQDLFASGEDLAGIMDALRWKSPRMPLAY 381