Pairwise Alignments

Query, 316 a.a., Site-specific recombinase, phage integrase family from Pseudomonas putida KT2440

Subject, 333 a.a., putative integrase/recombinase from Sphingobium sp. HT1-2

 Score =  108 bits (271), Expect = 1e-28
 Identities = 86/285 (30%), Positives = 133/285 (46%), Gaps = 29/285 (10%)

Query: 35  LPATAESIARYLADHADQH-AVSTLRQRLAALSQWHVAQGFPDPTK---APLVRQVLRGI 90
           LPA  + +A +    A+   A  T+ +R+AA++  H   GFP PT    A ++  +L G+
Sbjct: 58  LPAHPDIVALFAHVEAEAGIAPVTIGRRVAAINHHHKEAGFPSPTARDAAGVIATMLAGV 117

Query: 91  RTLHPTPPKQAAPLLLQHLQTAVTCFEEEARQAREHHDLAALRRARRDSALLLLGFWRGF 150
           R  +    +Q AP     L+  +   E                RA RD A+L +G    F
Sbjct: 118 RRKYARRKEQKAPAEADVLKAMLATIEGMGL------------RALRDRAILAVGMAGAF 165

Query: 151 RGDELARLRIEHIQ-AQAGVGITLFLPRSKGDREALGVQHRTPALKALCPVTAYLQWLEV 209
           R  ELA +++  +  AQ+G+ IT+  P+SK D+E +G     P  + + PV     WL  
Sbjct: 166 RRSELAAMQLPDLAFAQSGLRITI--PQSKRDQEQVGQVIAIPEGRIIRPVNLLKHWLHA 223

Query: 210 AGIA----------HGPVFRKLDRWGNLGDNALNSNSLVGLLRRMLERAGVPAALYTGHS 259
           AG++           G VFR+L R   L DN +   ++  L++     AG+  +LY+GHS
Sbjct: 224 AGLSGLDPATGKPRQGAVFRRLTRSDALTDNPITDKTVARLVKTAAAAAGLDPSLYSGHS 283

Query: 260 LRRGFATWATANGWELKSLMSYVGWKDAKSALRYIDSAQRFGDLA 304
           LR GF T A +    L  +  +   K   +   Y+ SA  F D A
Sbjct: 284 LRAGFLTEAASKRANLFKMKDHSRHKSLDTVADYVRSASMFEDHA 328