Pairwise Alignments

Query, 316 a.a., Site-specific recombinase, phage integrase family from Pseudomonas putida KT2440

Subject, 323 a.a., putative cointegrate resolution protein S from Pseudomonas putida KT2440

 Score =  434 bits (1117), Expect = e-126
 Identities = 205/311 (65%), Positives = 252/311 (81%)

Query: 1   MTDIERYLRAATRDNTRRSYQAAIEHFESHWGGFLPATAESIARYLADHADQHAVSTLRQ 60
           M D+ RYL+A TR+NTRRSYQ+AIEHFE  WGGFLPAT+++I RYL ++AD  ++STL+Q
Sbjct: 1   MKDVGRYLQAGTRENTRRSYQSAIEHFEVTWGGFLPATSDNIVRYLVEYADTLSLSTLKQ 60

Query: 61  RLAALSQWHVAQGFPDPTKAPLVRQVLRGIRTLHPTPPKQAAPLLLQHLQTAVTCFEEEA 120
           RLAAL+QWH+ QGFPDPTK P VRQVL+GIRTLHP   KQAAPL LQHL+ A+     EA
Sbjct: 61  RLAALAQWHITQGFPDPTKTPTVRQVLKGIRTLHPAQTKQAAPLQLQHLEQAIQWLSREA 120

Query: 121 RQAREHHDLAALRRARRDSALLLLGFWRGFRGDELARLRIEHIQAQAGVGITLFLPRSKG 180
            QA++  +LA+L R+RRD+ALLL+GFWRGFR DEL RL++EHIQA+AG G++LFLP+SKG
Sbjct: 121 EQAQQSGNLASLLRSRRDAALLLIGFWRGFRSDELCRLQVEHIQAEAGAGMSLFLPQSKG 180

Query: 181 DREALGVQHRTPALKALCPVTAYLQWLEVAGIAHGPVFRKLDRWGNLGDNALNSNSLVGL 240
           DR+ LG  H  PALK LCPV AYL W+  AGIA G VF +LDRWG+L D AL+  SL+ L
Sbjct: 181 DRDNLGTTHYVPALKCLCPVQAYLDWISAAGIARGAVFCRLDRWGHLSDEALHPGSLISL 240

Query: 241 LRRMLERAGVPAALYTGHSLRRGFATWATANGWELKSLMSYVGWKDAKSALRYIDSAQRF 300
           LR++L+RAG+ A LYT HSLRRGFA+WATANGW+LK+LM+YVGWKD KSA+RYID A  F
Sbjct: 241 LRQILQRAGISAELYTSHSLRRGFASWATANGWDLKALMTYVGWKDIKSAMRYIDPAISF 300

Query: 301 GDLAVLPASQV 311
           G LA  P  ++
Sbjct: 301 GGLAAKPVLEL 311