Pairwise Alignments

Query, 473 a.a., Group II intron-encoding maturase from Pseudomonas putida KT2440

Subject, 388 a.a., RNA-directed DNA polymerase from Pseudomonas simiae WCS417

 Score = 44.7 bits (104), Expect = 6e-09
 Identities = 53/220 (24%), Positives = 82/220 (37%), Gaps = 37/220 (16%)

Query: 84  MTVADLAGYVKQYWPTLKARLLAGEYHPQAVRAVEIPKPQGGT-----RQLGIPSVVDRL 138
           +T+  LA      +P L  R ++  Y  +A    ++ K   G      R +  PS     
Sbjct: 41  LTLNHLAHLAGVPYPFLH-RTISRTYRTEAYNVFKLRKANVGHSPDRFRWICAPSEDLLR 99

Query: 139 IQQALQQQLTPIFDPLFSDYSYGFRPGRSTHQAIEMARAHVTAGHRWCVELDLEKFFDR- 197
           +Q+ +   +    DP  + Y+Y  R     H  +E A  H   G  W ++LDL  FF+  
Sbjct: 100 VQRWINVHILSKVDPHEASYAYDKR-----HGVLEAAVLH--CGAEWLIKLDLTNFFESI 152

Query: 198 -----------------VNHDILMACIERRIKDKCVLRLIRRYLEAGIMSGGVVSPRQEG 240
                            V  ++   C   R       R     L  G+   G   PR   
Sbjct: 153 LEPRVYKLFRSFGYQPLVAFELARLCTRVRKSGNPDRRFGNTTLPVGLPYSG--DPRIGH 210

Query: 241 TPQGGPLSPLLSNILLDELDRELERRGHR----FVRYADD 276
            PQG   SP ++N+++  LD  L+         + RYADD
Sbjct: 211 LPQGAATSPRVANLVMQSLDENLQEYARENELVYSRYADD 250