Pairwise Alignments

Query, 473 a.a., Group II intron-encoding maturase from Pseudomonas putida KT2440

Subject, 482 a.a., Retron-type reverse transcriptase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  340 bits (871), Expect = 8e-98
 Identities = 175/408 (42%), Positives = 271/408 (66%), Gaps = 2/408 (0%)

Query: 55  LMERVLAPANLRRAYQRVVSNKGAPGADGMTVADLAGYVKQYWPTLKARLLAGEYHPQAV 114
           LM ++++P+NL  A ++VVSNKG+ G DGM+V +L  +   ++   +++++ G+Y  ++V
Sbjct: 56  LMGKIVSPSNLVAALRQVVSNKGSAGIDGMSVEELRQWFSSHYHEFQSQIITGKYRVESV 115

Query: 115 RAVEIPKPQGGTRQLGIPSVVDRLIQQALQQQLTPIFDPLFSDYSYGFRPGRSTHQAIEM 174
           R V+IPKP GG R LGIP+V DRL+QQA+ Q L+  +DP FSD SYGFRP R  H A+  
Sbjct: 116 REVQIPKPNGGVRILGIPTVKDRLVQQAISQVLSLHYDPTFSDRSYGFRPDRGAHDALRQ 175

Query: 175 ARAHVTAGHRWCVELDLEKFFDRVNHDILMACIERRIKDKCVLRLIRRYLEAGIMSGGVV 234
           A   V+ G  W V++DLEKFFD VNHD LM  +  RI DK +L+LI ++L AG++  G+V
Sbjct: 176 AGQEVSEGRDWIVDIDLEKFFDTVNHDRLMWLLGTRIGDKTLLKLIGKFLRAGMLKDGLV 235

Query: 235 SPRQEGTPQGGPLSPLLSNILLDELDRELERRGHRFVRYADDANIYVRSPRAGERVLVSV 294
           S   +G PQG PLSPLLSNI+LDELD+ELE RGHRFVRYADD  + V+S  + +RVL S+
Sbjct: 236 SQGVKGMPQGSPLSPLLSNIILDELDKELEVRGHRFVRYADDLIVMVKSEPSAKRVLSSL 295

Query: 295 ERFLRERLKLTVNRKKSQVARAWKCDYLGYGMSWHQQPRLRVARMSLDRLRDRLRMLLRS 354
             F+ +R+ L VN+ KS+++R ++ ++LG+ +    + RL +++ S  RL+ +L+ L + 
Sbjct: 296 TAFIEQRMLLKVNKSKSKISRPYELNFLGHSIL--IEGRLGLSKTSEQRLKAKLKQLTQR 353

Query: 355 VRARKMATVIERINPVLRGWASYFKLSQSKRPLEELDGWVRHKLRCVIWRQWKQPPTRLR 414
            R   +  +++ +NP+LRGW +YFK +Q    L+ ++GW+  ++RC   +Q K+  T  +
Sbjct: 354 NRGISLEQLVKELNPILRGWLNYFKNAQMIGRLKAIEGWLNRRIRCFRLKQCKRAFTMAK 413

Query: 415 NLMRLGLSEERANKSAFNGRGPWWNSGAQHMNYALPKKLWDRLGLVSI 462
            L RLG+   R+  +A + +G +  S     + A+  K +  +GL S+
Sbjct: 414 LLHRLGVPWNRSWATAGSSKGWYRLSVTPAAHEAMNLKWFGTIGLYSL 461