Pairwise Alignments

Query, 303 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 299 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  176 bits (447), Expect = 5e-49
 Identities = 104/289 (35%), Positives = 155/289 (53%), Gaps = 5/289 (1%)

Query: 7   GDIAAFVSAAKAGSFTAAAASLGLTRSAVGKSIARLEARMAVRLLNRTTRKLSLTDEGLV 66
           G ++ FV  A+  SFTAA   LG++ SAVGKSIAR+E R+ VRL +R+TR ++LT EG +
Sbjct: 5   GSLSVFVQVAETRSFTAAGRVLGVSSSAVGKSIARMEERLGVRLFHRSTRSITLTSEGAL 64

Query: 67  AFERWRQILDDLDEVESTMALRRGKPTGTLRLTAPLSLGQRHVLPVLDQYLKQWPELRAD 126
             ER R+IL +++  E  ++     P G LR++ P   G   ++PVL  +++ +P++  D
Sbjct: 65  FLERSRRILAEVEAAEQELSDASATPRGKLRISVPQVRGL--LMPVLSDFMRAYPDIELD 122

Query: 127 IRFTDRFVDLVEEGVDVAVRIGAPKEDSQLLTRTVAWQQFVTCASPAYLEKRGVPQIPGD 186
           + F+DR VD++EEG D  +R G P EDS+L+ R +   Q V   +P Y  + G PQ P  
Sbjct: 123 VDFSDRMVDVIEEGFDAVIRTGKP-EDSRLMARHLGHYQLVLVGTPGYFREYGTPQQPQH 181

Query: 187 LYGHD--KITFLAGEKAMPWRFHTEAGLHLCEDPGRLNIDSSEAMLDGARAGFGLIHLPT 244
           L  H   +  F A  K  PW      G       G     + E++      G G+  LP 
Sbjct: 182 LSDHACLRHKFCATGKLEPWPLRRAPGAPESILRGPFVSTTIESLNHVVHEGLGIACLPD 241

Query: 245 YITGDDLRAGNLVEVLHAYRPPADPIRIVYPSKRHLSPRVRGFIDLLVA 293
           Y+    +  G L  VL  Y        +++PS RH S ++R FID + A
Sbjct: 242 YMVNQAVAEGRLQRVLDDYLEHRGSFWMLWPSSRHASAKLRVFIDHMCA 290