Pairwise Alignments

Query, 303 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 301 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  179 bits (455), Expect = 5e-50
 Identities = 108/296 (36%), Positives = 160/296 (54%), Gaps = 2/296 (0%)

Query: 4   NRFGDIAAFVSAAKAGSFTAAAASLGLTRSAVGKSIARLEARMAVRLLNRTTRKLSLTDE 63
           +R  ++  F+   +  SF+AAA SL    S V K I RLE R+ VRL +RT+R L LT E
Sbjct: 3   DRIRELDVFLRVTEETSFSAAARSLDCNPSTVSKLIQRLEDRLRVRLFHRTSRVLKLTRE 62

Query: 64  GLVAFERWRQILDDLDEVESTMALRRGKPTGTLRLTAPLSLGQRHVLPVLDQYLKQWPEL 123
           G    E   ++LD L+E E+ +   + + +G LR  + L L Q  + PV+ ++L++ P +
Sbjct: 63  GEQFLEGAHRVLDALEEAENGLQNTKTRASGVLRFNSSLLLAQHQLSPVIPEFLERHPHM 122

Query: 124 RADIRFTDRFVDLVEEGVDVAVRIGAPKEDSQLLTRTVAWQQFVTCASPAYLEKRGVPQI 183
           R +   T   +DL E  +D++ + G    DS L+ R +A  ++  CASP YL K G+P  
Sbjct: 123 RVEFVLTASPIDLFENHIDLSFQSG-DIPDSSLVARRIATTRWTLCASPKYLSKAGIPMT 181

Query: 184 PGDLYGHDKITFLAGEKAMPWRFHTEAGLHLCEDPGRLNIDSSEAMLDGARAGFGLIHLP 243
             DL  H+ + FLAG     W     +        G +  +S+E +   A AG G++ L 
Sbjct: 182 LQDLQQHNCMNFLAGSVRSTWALQDGSEPVALNVNGNIGSNSAELLRAYAIAGVGIVRLS 241

Query: 244 TYITGDDLRAGNLVEVLHAYR-PPADPIRIVYPSKRHLSPRVRGFIDLLVATWEPG 298
                 DL AG L+ VL  Y+    +PI +VYPSKR+LSPRVR F+D L   +E G
Sbjct: 242 DVHVAADLAAGRLIRVLEKYQLASEEPIYVVYPSKRNLSPRVRAFLDFLNEKFEAG 297