Pairwise Alignments

Query, 303 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 304 a.a., Probable transcription regulator protein of MDR efflux pump cluster from Variovorax sp. SCN45

 Score =  187 bits (474), Expect = 3e-52
 Identities = 103/281 (36%), Positives = 162/281 (57%), Gaps = 4/281 (1%)

Query: 12  FVSAAKAGSFTAAAASLGLTRSAVGKSIARLEARMAVRLLNRTTRKLSLTDEGLVAFERW 71
           FV   +AG+FT AA SL L +  V K I  LE+R+ V+LLNRTTR++++T +G   FER 
Sbjct: 10  FVRVVEAGTFTRAADSLALPKGTVTKQIQALESRLRVKLLNRTTRRVTVTPDGAAYFERA 69

Query: 72  RQILDDLDEVESTMALRRGKPTGTLRLTAPLSLGQRHVLPVLDQYLKQWPELRADIRFTD 131
            ++L+D D++E++M   +  PTG LR+    S+ +  +LP L  +  ++P+++ D+  +D
Sbjct: 70  ARLLNDFDDMEASMTNAQANPTGRLRIDIGTSVARLVILPALATFCDRYPDIQVDLGVSD 129

Query: 132 RFVDLVEEGVDVAVRIGAPKEDSQLLTRTVAWQQFVTCASPAYLEKRGVPQIPGDL-YGH 190
           R VDL+ + VD  +R G    D  L+ R +    FVT ASPAY+++ G+PQ P D+   H
Sbjct: 130 RTVDLISDNVDCVIRAG-ELSDQSLVARRIGTLHFVTVASPAYIKRYGMPQHPNDIEKRH 188

Query: 191 DKITFLAG--EKAMPWRFHTEAGLHLCEDPGRLNIDSSEAMLDGARAGFGLIHLPTYITG 248
             +++ +G   +  P  F           P R++++ S A +     GFG+    T++  
Sbjct: 189 HVVSYFSGTTRRVYPHEFKKGDEQIELNGPYRVSVNESNAHIAAVLGGFGISQCITFMAE 248

Query: 249 DDLRAGNLVEVLHAYRPPADPIRIVYPSKRHLSPRVRGFID 289
             L +G LVEVL  +     PI +VYP  RHLS +VR F+D
Sbjct: 249 PLLESGELVEVLPDWSRDPLPIHVVYPPNRHLSAKVRAFVD 289